Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02496 ATGGTGAATGAGATGAAAAATGACATGCGTCGATCCAAGTTTTCGGTTAGGGAAGTTGGTGACCCACCATATCGCATATACTTGTTCTCACAATGTAGGTCTGATCTTTCTGCTTCTGAATGCGTATACTGCTTCAAATCCCTTCAAAGCGTTTTTTCCAGTTGCATGCCTGCCAAAGGTGCCCGAACCTATTCAAGTGATGGGTGTTTTATGCGCTATGATAATTATAGTTTTTTTCAAGAGAGCGTTACCCCTTATTATTTGAGGGGGTGTAGTGATGCCAAAGCAAAAGATGAAAAAGGATTTGTTGGTTTGGCAGTAAATGTAATAAATAAAATGTCATTCGAGGCACCCAAAAAGGGAGGCTACACAGCTATAGAAGGACGACGTCATGGTTCCAATCTCGTCATCTATGGTGCGGCTACTTGTTGGAAAACATTGAGCCAGGATATGTGTTCTGCTTGCCTCTCCAATGCTGCTAGCACCGCCATATCATGTTTGCCATCAACGCAGGTCCATGCTATCAATACTGGATGCATTTTGCGTTATGCTGATTATGACTTCATTATTATTGACTTGAAAAACAAAGAAAGCGATATTTTGATGAAATGCACAGCAATTATTCTTGCTGCAATTGCTGTTTGTTCAGTGCTTATTATAGTTGCACACTATGGGACTAAAAATGTTGACAAACTGTGGGGTATTCCAATTTTAAGAACAGGACTAGAGATGACCCCAGGTAGAGTAAAATTAAGCTCATGGTTCATGCAGTTCGAGTACTCGACGTTAGAGAGAGCAACCAATGTTTTCAATGAATTCCATAAACTTGGTGAAGGGGGATATGGTGAAGTTTACAAGGGAACCTTACAAGACGGAAGAGAAATAGCGATAAAGCGTTTCTTTTTGAGTGGAAAGCAGGGAAAACAAGAAGTTTACAATGAAATTGATGTATATGGCAAAGCTCAACACAAGAATCTAGTTCGTTTCCTTGGCTGCTGCTTCACCTCCACAGAAAGTTATCTGGTTTTTGAATTCCTTGCAAACAAAAGCCTTAACTGCATCTTGTTTGACCCGGAGAAGAAGAAGCAGTTGGATTGGCCAAAGAGGCATGGTATAATCCTTGGCGTAGCTGATGGATTGGAACATCTGCATAACAATTCTGAAGGGCCAATAATTCATAGAGACATCAAAGCCGGAAACATTTTATTAGACTTGAAATATAGACCAAAGATCTCTGATTTTGGCTTAGCAAAGTTGAAGTCCTATGACTCTACATCTATTGTAGGCACATTGGGGTATATGGCACCAGAATACCTTGCTGGTTGTTCCATAACAGAAAAAGTAGACGTTTACAGCTTTGGAATATTAGTGCTTGAAATTATCAGTGGAGTGGAGAATGCAAAATTTGAGTCTACTGAAGAAACATTTGAAACTCTTGTTTCTCATGCATGGAAGCATTTCAAATCAAACACCACGTCAAAAATTATTGATGAAAGCATGGAAAATCAAGATCTTGAAGAAATTACAAGAGTTATCCATGTGGGACTTTTGTGCACACAAGAGTTGCCGTACCTGCGTCCCAGCATGACAGAGGTGGTAGCAATGCTTAGACAGAAGGATGTTGTAATGCCATTACCTTCCAAACCTCCATTCACTGTTGATTCTTTCGAATTTCCACAAGAAATAGAATCTAGTTGGGAATCAAAAGGTTTAGATAATTCAGAATTGACAGTGCCTTTAAATTTTGGAGAAAGAAGTGTGTAA 1764 0.3951 MVNEMKNDMRRSKFSVREVGDPPYRIYLFSQCRSDLSASECVYCFKSLQSVFSSCMPAKGARTYSSDGCFMRYDNYSFFQESVTPYYLRGCSDAKAKDEKGFVGLAVNVINKMSFEAPKKGGYTAIEGRRHGSNLVIYGAATCWKTLSQDMCSACLSNAASTAISCLPSTQVHAINTGCILRYADYDFIIIDLKNKESDILMKCTAIILAAIAVCSVLIIVAHYGTKNVDKLWGIPILRTGLEMTPGRVKLSSWFMQFEYSTLERATNVFNEFHKLGEGGYGEVYKGTLQDGREIAIKRFFLSGKQGKQEVYNEIDVYGKAQHKNLVRFLGCCFTSTESYLVFEFLANKSLNCILFDPEKKKQLDWPKRHGIILGVADGLEHLHNNSEGPIIHRDIKAGNILLDLKYRPKISDFGLAKLKSYDSTSIVGTLGYMAPEYLAGCSITEKVDVYSFGILVLEIISGVENAKFESTEETFETLVSHAWKHFKSNTTSKIIDESMENQDLEEITRVIHVGLLCTQELPYLRPSMTEVVAMLRQKDVVMPLPSKPPFTVDSFEFPQEIESSWESKGLDNSELTVPLNFGERSV 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02496 587 SUPERFAMILY Protein kinase-like (PK-like) 252 539 IPR011009 -
Adu06g02496 587 SMART serkin_6 270 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g02496 587 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 43-RELATED 2 566 - -
Adu06g02496 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 391 403 IPR008271 GO:0004672|GO:0006468
Adu06g02496 587 Gene3D Transferase(Phosphotransferase) domain 1 346 549 - -
Adu06g02496 587 Gene3D Phosphorylase Kinase; domain 1 243 345 - -
Adu06g02496 587 Gene3D - 1 78 IPR038408 -
Adu06g02496 587 Gene3D - 84 188 IPR038408 -
Adu06g02496 587 ProSiteProfiles Gnk2-homologous domain profile. 1 78 IPR002902 -
Adu06g02496 587 ProSitePatterns Protein kinases ATP-binding region signature. 276 298 IPR017441 GO:0005524
Adu06g02496 587 ProSiteProfiles Protein kinase domain profile. 270 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g02496 587 Pfam Protein kinase domain 270 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g02496 587 Pfam Salt stress response/antifungal 12 76 IPR002902 -
Adu06g02496 587 Pfam Salt stress response/antifungal 98 186 IPR002902 -
Adu06g02496 587 ProSiteProfiles Gnk2-homologous domain profile. 84 188 IPR002902 -
Adu06g02496 587 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 2 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02496 Adu-Chr6 99530114 99533862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02496 2 556 Receptor kinase-like Gene Family AT4G28670 47.603 1.60e-176 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu06g02496 Pkinase 3.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02496 - - aip:107614699 1108.59