Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02487 ATGAAGACATCATCATTCACTGACCTCCTTTCAAACAACTATAGTAACATAAACATGAACATGGATGATTTTGGTGATGCTCTTATTCAAAACCAAGAATCTGTTCCAAAATTCAAGTCTGTTACACCACCTTCACTACCACTTGAGAACTCACAAACTTCTTCTTACTTTCCTTTTACATCATCAACTTTTAGCCCAACTGAGTTTTTGAACTCATCTTTGTTCCTTTCTTCTCCTAATATTTTTGCATCTCCTACTATTGAGGCTTTTGCTGGCCACAGCTTCAACAACAAGGAAGATGAGAAGAACTTCTCTGAATTCTCTTTCCAAACACAGACTAAGACAGCTTCTCCCTCTCAAGCAGAACCACTTAAGACACAAGACATGTGGAAATTCACAGAACCTATAAACCAAGCTGAATTTTCATCTCAGAGGGAAGCAACAAAATCTGAATATCCATCAACACAGAGCTTCTCCTCAGAAATGGTAGCAACAAAACCCGAATTACAAAGCAATTCGGTGCCTGAGTCCGGTTCTTTCAACTATGCTAACACGTCTCAGTCCATTAAAGAACAAAGGAGATCAGAAGATGGTTACAATTGGAGGAAATATGGACAGAAACAAGTGAAAGGGAGTGAGAATCCAAGGAGCTATTACAAGTGCACGCATCCGAGTTGCGCAATGAAGAAGAAAGTTGAGAGGTCTTTGGAGGGACAAATTACTGAGATAGTGTATAAGGGAACTCATAATCATCCTAAGCCACAGAGTACTAGAAGAAGTTCAAGCTCTCAACAAATTATTCATCAGCAGCCTTCTTCATCCTGCACTAACTCAGGAATCTCGGATCAGTCAGTGGTGACACTAGGCAATCCTCAACTTGATCGTGTGTCGATGCAAGAAGATTCTTCAGCTTCTATGGGAGAGGAAGAATTTGAACAAACTTCTCCAACAAGTTACTCTGGTGGAGATGCAGATGAACTTGGACCAGATGCCAAAAGATGGAAGGGGGAGAATGAACATGATGGTCATTCAGCCTATGGAAGTAGAACTGTTAGGGAACCTAGAGTTGTAGTTCAAACTACAAGCGAAATCGATATTCTTGATGATGGCTACAGATGGAGGAAATATGGACAGAAAGTAGTTAAAGGAAATCCAAATGCAAGGAGTTATTACAAATGCACAGCCCCTGGTTGTTCAGTGAGGAAACATGTTGAGCGAGCCGCGACTGATATAAAATCAGTGATCACAACTTATGAAGGGAAACACAACCATGATGTGCCTGCAGCACGCGGCAGCGCAGGTTACAACATGAACAGAAACTCTCTAAATAGAAACAATAGCAATGCACCGGCGGCACCAATAAGGCCTGCGGCCGTGAATGGTTATTCTAGCGCGCCGAATTTCACAAATTCACTTTACAATCCTAGGCTTCCGGCCACCGGAACTCAAGAATCATCTTCCCTAGACATGCTGCAAGGCTCTGGACTTTTCGGCTACACGTCTCTTGGAAGATCAATGGGTTCATATGGAAACAATTCGCAACTCTCGGATGGTGTATACATCAAGGCCAAGGATGAAAGGAAGGATGACTCATTCCTTGAGTCATTTCTTTCAAAGAACTAA 1623 0.4196 MKTSSFTDLLSNNYSNINMNMDDFGDALIQNQESVPKFKSVTPPSLPLENSQTSSYFPFTSSTFSPTEFLNSSLFLSSPNIFASPTIEAFAGHSFNNKEDEKNFSEFSFQTQTKTASPSQAEPLKTQDMWKFTEPINQAEFSSQREATKSEYPSTQSFSSEMVATKPELQSNSVPESGSFNYANTSQSIKEQRRSEDGYNWRKYGQKQVKGSENPRSYYKCTHPSCAMKKKVERSLEGQITEIVYKGTHNHPKPQSTRRSSSSQQIIHQQPSSSCTNSGISDQSVVTLGNPQLDRVSMQEDSSASMGEEEFEQTSPTSYSGGDADELGPDAKRWKGENEHDGHSAYGSRTVREPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNARSYYKCTAPGCSVRKHVERAATDIKSVITTYEGKHNHDVPAARGSAGYNMNRNSLNRNNSNAPAAPIRPAAVNGYSSAPNFTNSLYNPRLPATGTQESSSLDMLQGSGLFGYTSLGRSMGSYGNNSQLSDGVYIKAKDERKDDSFLESFLSKN 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02487 540 MobiDBLite consensus disorder prediction 142 218 - -
Adu06g02487 540 MobiDBLite consensus disorder prediction 250 321 - -
Adu06g02487 540 Pfam WRKY DNA -binding domain 196 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu06g02487 540 Pfam WRKY DNA -binding domain 368 424 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu06g02487 540 MobiDBLite consensus disorder prediction 142 189 - -
Adu06g02487 540 SUPERFAMILY WRKY DNA-binding domain 191 254 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu06g02487 540 SUPERFAMILY WRKY DNA-binding domain 359 427 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu06g02487 540 SMART WRKY_cls 367 426 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu06g02487 540 SMART WRKY_cls 195 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu06g02487 540 ProSiteProfiles WRKY domain profile. 362 427 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu06g02487 540 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 302 538 - -
Adu06g02487 540 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 26 297 - -
Adu06g02487 540 MobiDBLite consensus disorder prediction 245 346 - -
Adu06g02487 540 MobiDBLite consensus disorder prediction 326 346 - -
Adu06g02487 540 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 302 538 IPR044810 GO:0003700
Adu06g02487 540 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 26 297 IPR044810 GO:0003700
Adu06g02487 540 ProSiteProfiles WRKY domain profile. 190 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu06g02487 540 Gene3D WRKY domain 181 255 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu06g02487 540 Gene3D WRKY domain 352 428 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02487 Adu-Chr6 99305760 99308888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02487 35 537 WRKY Transcription Factor Family AT2G38470 46.300 1.46e-115 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu06g02487 WRKY 1.3e-23 CL0274