Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02448 ATGAATCATAAAACCACTTGTTGGGTTGCATTGATACTCTCAATGTGTCTAAGTTCGACAATAACAACGTTGGAGGGTGTTCGTCCAATAATGCGTAATATTCAACAACAAAAGGGTGCAAATGGAAATAGATGGGGTGTCCTTGTTGCTGGTTCTAATGGGTATGAAAACTATAGGCACCAAGCTGATGTATGCCATGCCTATCAAGTACTAAAGAAAGGTGGTCTTAAGGATGAAAACATCATTGTTTTCATGTATGATGACATCGCTAATAACACACAAAACCCAAAACCTGGTACTATAATCAATAAACCCAACGGTCCAGATGTTTATAAAGGTGTTCCCAAGGATTACAGTGGAGAACATACAAATGCCAAAAAATTTTATGCTGTGCTTAGTGGTAACAGAAGTGCTATTACTGGAGGCACTGGTAAAGTGGTGGACAGTGGCCCTAATGACACCATTTTTATTTACTATGCTGATCATGGTGCCCCCGGCTTCGTTACTATGCCGGTTGGTGAGAATGTTTTTGCCAACGATTTTATCGATGTGTTGAAAAAGAAACACGCCGCTAAGGGCTATAAAAAGATCGTGATATACTTGGAAGCATGTGAATCTGGGAGCATGTTCGAAGGGATTCTAACGAATAATTTAAACATATACGCAACCACTGCTTCCAATTCAACTGATCCGAGTTTTGCTGCTTATTGTGATAATGAATATGACACTTGCTTGGGCGACGTCTTTAGTGTTTCATGGTTAGAAGACAGTGACAAAACTGATGGGAGGAAAGAAACTCTGAAACGGCAATATGAAAGGGTTAGAGAGAGAACATTACATTGGGACGATGGCTCCAGTTCTGAGGTCATGCAATATGGAGATAAAATGATCAGCAATGATTTTCTGGTTAACTACATTGGTGCAAACCCTGCCACCAACAAGAATAGTAAAACGAATAATGCATATTTTTTCGATGCTCCAACAATATTTGTCAGCCAAAGAGATGCTACTATTCTCCATCTAAGGCACAAGTTGAGCATTGCTCCAGAAGGTACGAGTGAAAAATCAGAAGCTGAAAAGAGATTATTACTTGAAATAGCTGAGAGGGAGCAAGTAGACAATTACATAAAACGTATTGTAAATCTCTTATTTGGAGAAAAGAGTGGCTATGAGGTGGCATCAGTGATCTCAAGTGTTCGTCCATCAGGCCAACCTCTTGTGGATGATTGGGATTGCTTCAAGAATTATATGAAAATTTATGAGACCCATTGCGGCACTTTATCAACTTATGGGAAAAAATACTCGAGGACTTTTGCTAACATATGCAATGCTGGCATTTCTGAAGAGCAAATGATTGTAGCATCAGCTAAAGCTTCTTTTCCACCACCGCCGCAAGGACTGCCGCCGCCCGTCCCGCTCCGGCAAACGCAGTCGTCGTTTGGTTGTCCGCTCTTCTTCCTCATTCAAGAATCGCACCTTATCCCTCGAGCTGGGCGTCAGTCCCTGGTCTTTGTCTGCTCCGTGGTGCTCCTGCCGTCGTCCGTCGCGCTCAGGCACCACTGTCTTCGTCTGGTCGTGGTGCTCGAAGTTTCCAACCCACCAATCGCAGCTTCTTCCTCGAGCTCGGCGTCTTGGAGTCTGCCCTTCGTTTGCTCAGCCGCAGCACTTCCAATCCACCACTGTCTTCGAGTCGTGATCGTCGCCTGGCCTTCGTCTCCGTCGCGCTTCTGCCCCTCTGCTCAGAGTGCTCAGAAGTCAGAACGAAGGTTTAGGATTCTGCTAGTGCTACTTAGGAACTCATTCTTGACAACTTTGCGAGTCACCAAGAGAGGGCAAGAAACAATGGCAGCAATGATGCAAGGAGTGCAGAAGAACACTCTATATGTGGGTGGTTTAGCTGAGGAAGTTAACGAGTCCATACTTCATGCAGCCTTCATACCCTTCGGGGACATTAAGGATGTTAAGACCCCACTTGACCAGGCAACGCAGAAGCACAGGTCGTTTGGCTTTGTTACATTTCTTGAGAGGGAGGACGCTGCTGCCGCCATGGATAACATGGATGGCGCTGAACTCTACGGCCGTGTACTCACTGTTAACTATGCCCTCCCTGAGAAAATCAAGGGTGGTGAGCAGGGCTGGGCCGCTCAACCAATTTGGGCTGATGCTGACACCTGGTTTGAGCGGCAACAACAAGAAGAAGAGATGCGTCGTCTTGAGGCAGAGAGTCGAGCTGCAAATCAGGCAGCAGAAGACCTGCGCAGGAAAAAAGCTGCCGAAGAGCGGGAAGGAGAAAAAGAAGACGAAATTGATCCCATGGCAAAGGCCGAAGCAGAGGCTCTGCAACAGAATAACTAG 2355 0.4565 MNHKTTCWVALILSMCLSSTITTLEGVRPIMRNIQQQKGANGNRWGVLVAGSNGYENYRHQADVCHAYQVLKKGGLKDENIIVFMYDDIANNTQNPKPGTIINKPNGPDVYKGVPKDYSGEHTNAKKFYAVLSGNRSAITGGTGKVVDSGPNDTIFIYYADHGAPGFVTMPVGENVFANDFIDVLKKKHAAKGYKKIVIYLEACESGSMFEGILTNNLNIYATTASNSTDPSFAAYCDNEYDTCLGDVFSVSWLEDSDKTDGRKETLKRQYERVRERTLHWDDGSSSEVMQYGDKMISNDFLVNYIGANPATNKNSKTNNAYFFDAPTIFVSQRDATILHLRHKLSIAPEGTSEKSEAEKRLLLEIAEREQVDNYIKRIVNLLFGEKSGYEVASVISSVRPSGQPLVDDWDCFKNYMKIYETHCGTLSTYGKKYSRTFANICNAGISEEQMIVASAKASFPPPPQGLPPPVPLRQTQSSFGCPLFFLIQESHLIPRAGRQSLVFVCSVVLLPSSVALRHHCLRLVVVLEVSNPPIAASSSSSASWSLPFVCSAAALPIHHCLRVVIVAWPSSPSRFCPSAQSAQKSERRFRILLVLLRNSFLTTLRVTKRGQETMAAMMQGVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDAAAAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFERQQQEEEMRRLEAESRAANQAAEDLRRKKAAEEREGEKEDEIDPMAKAEAEALQQNN 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02448 784 PIRSF AE 1 465 IPR043577 GO:0004197|GO:0051603
Adu06g02448 784 CDD RRM_PPIE 627 699 IPR034168 GO:0003723
Adu06g02448 784 Pfam Peptidase C13 family 44 306 IPR001096 GO:0006508|GO:0008233
Adu06g02448 784 Gene3D - 42 329 - -
Adu06g02448 784 MobiDBLite consensus disorder prediction 731 784 - -
Adu06g02448 784 MobiDBLite consensus disorder prediction 731 774 - -
Adu06g02448 784 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 627 696 IPR000504 GO:0003723
Adu06g02448 784 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 625 703 IPR000504 GO:0003723
Adu06g02448 784 Gene3D - 606 766 IPR012677 -
Adu06g02448 784 SMART rrm1_1 626 699 IPR000504 GO:0003723
Adu06g02448 784 Gene3D - 333 460 IPR046427 -
Adu06g02448 784 SUPERFAMILY RNA-binding domain, RBD 622 712 IPR035979 GO:0003676
Adu06g02448 784 Coils Coil 728 762 - -
Adu06g02448 784 PRINTS Hemoglobinase (C13) cysteine protease signature 117 132 IPR001096 GO:0006508|GO:0008233
Adu06g02448 784 PRINTS Hemoglobinase (C13) cysteine protease signature 194 210 IPR001096 GO:0006508|GO:0008233
Adu06g02448 784 PRINTS Hemoglobinase (C13) cysteine protease signature 70 99 IPR001096 GO:0006508|GO:0008233
Adu06g02448 784 PRINTS Hemoglobinase (C13) cysteine protease signature 145 164 IPR001096 GO:0006508|GO:0008233
Adu06g02448 784 PRINTS Hemoglobinase (C13) cysteine protease signature 45 69 IPR001096 GO:0006508|GO:0008233
Adu06g02448 784 PANTHER LEGUMAIN PROTEIN-RELATED 1 458 - -
Adu06g02448 784 PANTHER HEMOGLOBINASE FAMILY MEMBER 1 458 IPR001096 GO:0006508|GO:0008233
Adu06g02448 784 PIRSF Legumain 4 465 IPR001096 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02448 Adu-Chr6 98636045 98652376 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02448 618 703 Eukaryotic Initiation Factors Gene Family AT3G11400 36.047 1.36e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02448 K01369 - gmx:100788554 556.599