Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02433 ATGTCATTAATTGAAATTGATTTTCACAGATGGAATCTTGCAATGTCTGCAGATGTGCACAGCATGATAAGGGATAGGAATGGAGAGCATGGGTGTAATGAGGATTTCGACGATGCATGTGATGTCGGTGCCGCAGACATTGTATCTGATGAGGATGCATCAGACTACGGTAACGTTATCAGATTGAGTGACCAACAGATAATGACAAAGGTGTTTCGGAGTGAGGAACGTGCCGATGAATTTTATTGTAAATTTGGAAGATGTCATGGATTCGGTGTGCGCAAGGGAGATTATGGCAAGGATGACCATGGAAATTTGATACGAAGAAGATTCTTTTGCAATAGGGTAGGATTGAGAGATGAAAAATACCTTCATAGATTGGATAGACAAAGGGGTCACCGACCTGAAACACTGACTAATTGTATGGCGAAGTTGTCGATTTACCTAGATAGGGAAAACTCAGTATGGAAGGTTCGAAAAGTTATCTTGGAGCATAATCATGAGTTGACACCGCGAGTAATGGTGCACATGATTCCAAAATTTCGTCAGATGTCAAATGCTGCAAAGGCACACACAGACGGCATGCATGGGTATGGTGTACCTATGTCTAAGATTCTCGGCTATATGGCTGGGATTGCCGGAGGATATTCTTTGTTGGGGTTTACGAAAAAAGATGCATATAACTACATCGACAAGATGCGTTGTTCAAAGATTACTGATGGTGACTCAAATGCTGCCATTGTATACCTAGAGGGAAAGGTGGCAGCCGATCCAATGGCGATGGCTAGGTTTAACTTAACAGAGGATGGTATGTTAGCGAatatgttctgggctgatggaattagtagagtcgactaccagtacttcggagacaagaatgTTACTTCAAATGGAAGTGAGCAAATGTTTCGTGAAATATTCTCTAAGTGGCTATATGCGGACATGGAGGTTGACGAGTTTGAGTTCCAATGGGATCAAGCTGTTGGCGAGTACGGTTTACACCAAAAATGTTGGGCAACACAGATGTATGAAAAGAGGCACATGTGGGCAAGCGCATACCTACGCGGCAAGTTTTGTGTTGGATACTGGACCACATCTAGATGTGAGGGGATAAATTCTCATGTCAAGAAATTCCTAATATCGAGACACAGTATTGTGAACCATGTGCAAAATATATGGAGTTGGTGGTCTGTGAATACCCATGAGCATTTGAAGGATATTCCAAGCCGTTTGATTCTGAAGCGATGGAGGAGAGATGCCAAGGCTATTGATGAGAGCCCCCGCTCAAGAGGACAAAAGGGAAAAAAGAGGAAATGTACCAACTGCATGAAGGCCGGCCACACTAAACGAAAATGTCTTCAACGGAACACCAATTTCTTAAAAGGGGGTAGTGAAGATGATGAAGAAGACGAGGAATCAGTTGTAAGACTAGCCGATGAGAAGGTTTTAAAAGGAAAAGGGCATTTACGAAGGAGTAAGAGGAGGGCTGCTGCACAGGTCAAACAGGATAATGTTGACACAAATGAAACTGTAGCTGCTTTGTCGACGGAGCCTATAATCAGAACTGCCCAAAGCGAGAATGTAATTTCGTGGCCTGGTGTAGGCAATTCCGATTACCATGCGCTTGTAGGCCATCTTTTATGTCCTGGAGCTTCTAGAATCACTGAAAAAAGGGACATAACTCCATCTGTCACATTAAGACTGGTTTTACTTGTAGCATACTATGTTTGTAAAATAGTTCGAGGTTCTGTCCTCGGAGAGTTAGCTGTTGTGCACCAGTGA 1782 0.4158 MSLIEIDFHRWNLAMSADVHSMIRDRNGEHGCNEDFDDACDVGAADIVSDEDASDYGNVIRLSDQQIMTKVFRSEERADEFYCKFGRCHGFGVRKGDYGKDDHGNLIRRRFFCNRVGLRDEKYLHRLDRQRGHRPETLTNCMAKLSIYLDRENSVWKVRKVILEHNHELTPRVMVHMIPKFRQMSNAAKAHTDGMHGYGVPMSKILGYMAGIAGGYSLLGFTKKDAYNYIDKMRCSKITDGDSNAAIVYLEGKVAADPMAMARFNLTEDGMLANMFWADGISRVDYQYFGDKNVTSNGSEQMFREIFSKWLYADMEVDEFEFQWDQAVGEYGLHQKCWATQMYEKRHMWASAYLRGKFCVGYWTTSRCEGINSHVKKFLISRHSIVNHVQNIWSWWSVNTHEHLKDIPSRLILKRWRRDAKAIDESPRSRGQKGKKRKCTNCMKAGHTKRKCLQRNTNFLKGGSEDDEEDEESVVRLADEKVLKGKGHLRRSKRRAAAQVKQDNVDTNETVAALSTEPIIRTAQSENVISWPGVGNSDYHALVGHLLCPGASRITEKRDITPSVTLRLVLLVAYYVCKIVRGSVLGELAVVHQ 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02433 593 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 301 387 IPR031052 GO:0006355
Adu06g02433 593 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 71 291 IPR031052 GO:0006355
Adu06g02433 593 PANTHER OS03G0181600 PROTEIN 301 387 - -
Adu06g02433 593 ProSiteProfiles Zinc finger CCHC-type profile. 437 452 IPR001878 GO:0003676|GO:0008270
Adu06g02433 593 PANTHER OS03G0181600 PROTEIN 71 291 - -
Adu06g02433 593 SUPERFAMILY Retrovirus zinc finger-like domains 427 455 IPR036875 GO:0003676|GO:0008270
Adu06g02433 593 Pfam FAR1 DNA-binding domain 80 170 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02433 Adu-Chr6 98380911 98384160 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu06g02433 FAR1 7.2e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02433 - - adu:107465151 397.897