Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02420 ATGGTTAGTGAAGACCAAAAACGAAGCCCCAGAAACCAGAAGTACCCTGCAACTGAGGGAAATGGCCAAAGCCAAAACCTTAACGATGCCGTTTTCAGTCCGCGATTCAAATCTGCGGCAGCTATGGCCGGCTGGGACGAAGAGGCACTGCTTCTCGCAAGCCTCGTCGTTGAAGACACACCCGATAGAGATTTCAAACACAAGAAGCGCTCTGTCTTGAACTCCAAGACTCCACCCACCAATTCAAGAAGGAAACGCAGAGCACAGAGTTCTCCAGAATCGATACGAGTGGCTGTTCTTGATCTTGACGAAGAAGACACTCCAAGAAAAGATAGTGGGAAAAAGACTAAAGAAAAGAAGGCCACTGTAAACGAAGAGAGTAAAGAAGGAGGGAAGGAATCCGGTGTTGCTGCACTTCCCTGCATTGATAAGCTCAGAGACGAGCTTTCTTGCGCCATTTGTTTGGAGATATGCTTTGAGCCAAGTACCACCCCTTGTGGTCACAGCTTTTGTAAAAAGTGCCTTCGATCTGCTGCAGACAAATGTGGCAAAAAATGCCCAAAATGCAGGCAATTAATAGGCAATGGAAGATCATGCACTGTGAACACTGTTCTCTGGAATACAATACAGCTCCTGTTTCCCCAAGAAGTTGAGGCAAGGAAAGCGGCCGGCGCCATAAATAGCCGGCAACAATCTAAGTGCCTGAGCCCAGAAGCAGCATTTTACAACAATTTAAGGAATGGTGAAAGCACAACAACCAGAGGTGGTGTCAGTACAAGGAGAAGCAGCGGTAGGGCTGCCGCAATAACTGATCAGGAAGCAAGGCGGCTCCAAGGTGTGAGATCAAGAAGAGGGATTACTCCTGCTACACAAACTGAGGATGCAGCAATTGCCCTGAGGCTGCAGAGAGAGGAGTTTATGCAGGCCTTTAGGGGAACACAGGAACAACACCATTCCAGCAGATCCTCATCTGTGGATTTAGCTAGAGAAAATTTGAGGGCAATGGCATCTAGAGCCATGAGTCTTCGCATTAGAGATCGAAGATTTTGA 1050 0.4771 MVSEDQKRSPRNQKYPATEGNGQSQNLNDAVFSPRFKSAAAMAGWDEEALLLASLVVEDTPDRDFKHKKRSVLNSKTPPTNSRRKRRAQSSPESIRVAVLDLDEEDTPRKDSGKKTKEKKATVNEESKEGGKESGVAALPCIDKLRDELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKKCPKCRQLIGNGRSCTVNTVLWNTIQLLFPQEVEARKAAGAINSRQQSKCLSPEAAFYNNLRNGESTTTRGGVSTRRSSGRAAAITDQEARRLQGVRSRRGITPATQTEDAAIALRLQREEFMQAFRGTQEQHHSSRSSSVDLARENLRAMASRAMSLRIRDRRF 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02420 349 Pfam Zinc finger, C3HC4 type (RING finger) 151 189 IPR018957 GO:0046872
Adu06g02420 349 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 100 220 IPR013083 -
Adu06g02420 349 MobiDBLite consensus disorder prediction 63 129 - -
Adu06g02420 349 MobiDBLite consensus disorder prediction 98 129 - -
Adu06g02420 349 ProSitePatterns Zinc finger RING-type signature. 166 175 IPR017907 -
Adu06g02420 349 ProSiteProfiles Zinc finger RING-type profile. 151 190 IPR001841 -
Adu06g02420 349 PANTHER - 26 230 - -
Adu06g02420 349 PANTHER - 250 347 - -
Adu06g02420 349 SUPERFAMILY RING/U-box 143 214 - -
Adu06g02420 349 MobiDBLite consensus disorder prediction 13 29 - -
Adu06g02420 349 SMART ring_2 151 189 IPR001841 -
Adu06g02420 349 PANTHER UNCHARACTERIZED 26 230 - -
Adu06g02420 349 PANTHER UNCHARACTERIZED 250 347 - -
Adu06g02420 349 MobiDBLite consensus disorder prediction 1 29 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02420 116 193 C2H2 Transcription Factor Family AT5G39550 37.975 9.18e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02420 - - gmx:102666585 413.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02420 06 98086820 98088363 Adu06g02420 06 98086820 98088363 ECH