Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02399 ATGACGGTGTTTTCCGGCAGCAGACAAGTGTTTCCGATTGACTTCGAGGCGGAGGTGTTACTGTTAAAACATGGTAAGGGAGCTGATGTAAACCAGAAGCTCTTCAGGGGCTTTGCAACGACTGCAGCAGTAAAGGAAGGCCATATTAGTATCCTTGAGATGTTACTGAAAGCAGGGGCATCACAACCAGCATGTGAAGAAGCTCTTGTTGAGGCAAGCTGCCATGGGCAAGCAGGGTATGCTGAGTTACTCATGAGCACTGATTTGATCAGACCGCACGTTGCTGTTCATGCTCTTGTGACCGCATGCTGTAGAGGATTCGTTGATGTGATTAGGATGCTTATAAAGCGCGGTGTGGATGTCAATGCAACAGACCGGGTGCTTTTGCAGTCACTTAAGCCTTCTCTTCATGCAAATGTGGACTGTACTGCGCTTGTCGCAGCTGTAATTCACAGGCAGCTCCCTGTTGTGGATTTGCTACTGAAGAATGGTGCTAGGATAGATTCTGAGGTGAGGCTTGGAGCATGGTCATGGGACATTTCAACTGGTGAAGAGCTTCGTGTTGGTGCTGGTCTGGGAGAACCATATGACATTGCCTGGTGTGCAGTTGAGTATTTTGAAAGGAGTGGTGCCATATTGCGGTTGATCCTACAACATATCTCCTCCAAGAATCCTCACCATGGAAGAACCCTTCTGCACCATGCCGTCCTTTGTGGCAATGATGAAGCCGTCAGAGCACTCTTAGAATTCGGTGATAGCGTGGAATCTCCAGTCAAAACAACCAACAAGGCTGAGTTCCTTCCTTTACACATGGCATCCCGACTTGGCTTTCCAACAATCATTCAATGCCTTATTGATTTTGGTTGTGATTTGAACTCAATAACAGACTCAGGTGACACAGCTTTGATAATCTGTGCAAAATATAAACAAGAGGAGTGTCTCAAAGTACTAACAAGGGCAGGTGCTGATTTTGGTTTGGTGAATGTTTCTGGTCAATCTGCATGTTCAATTGCAGAGGCAAACAAGTGGTCACATGGTTTTCAACAGGCATTGTTGGATACAATCCGAAAAGGCAAGATACCAAAATCCGGCAATATTTCTGTGTTTTCGCCGTTATTGTTCACAGCTCAAGCTGGGGATGCGGAAGCACTGAAAACTCTAGTTGAATCTGGAGAGTTTGATCTTGACTATCAAGATGAGAGAGGCTTCTCTGCAGTTATGGTTACTGCTCTAAATGGCCATGCTGAATCATTTCGGTTGCTTGTATATGCTGGTGCTGATGTGAAGTTATGCAATAAATATGGTGAAACAGCAATAACTCTATCTAAACTGAATCAGAACTGTGATCTATTTGAACAGGTCATGCTTGAATTTGCAATTGAAAAGGGCAATCGCAATGCCTGTGGCTTCTACGCTTTACATTGTGCAGCTCGTCGTGGAGACTTGGATGCTGTCAAATTGCTCACAAACAAAGGCTATGATGTGAATGCCCCTGATGGGGAGGACTACACTCCTCTTATGTTAGCAGCAAGGGAAGGCCATGCATCCATTTGCAAACTTCTGATTTCATGCGGTGCTCATTGCAATGCTAAGAATTCTAGAGGGGAAACTCCACTTCTATTTGCAAGGAAATCTTCAGGAGGGGCTAAAAATGAAGCACAGGCCGTTATTCTAGACGAATTAGCGCGAAAACTGGTGCTACATGGCTCCTATGTATTGAAGCACACAAAATGCGGGAAGGGCTCCCCACATGGGAAACAAATAAGGATGTTAGGATCTGCAGGTGTTCTTTGTTGGGGGAAATCAAGCAGCAGAAACGTGATCTGCCGTGAGGCAGAGTTAGGGGCAAGTTCGACATTACGTAGAAACAGGTACAAGAAAGGTGATGCAGATGAACCTGGAATGTTTAGAGTGCTCACGAACAAGAACAAGGAAGTGCATTTTGTATGTGATGGGGGTTTAGAAGTTGCTGAGCTTTGGGTCAGAGGTATAAAACTTGTAACGAAAGAGGTTTATTTTGTTAAGGGATCCATCTCATAA 2040 0.4495 MTVFSGSRQVFPIDFEAEVLLLKHGKGADVNQKLFRGFATTAAVKEGHISILEMLLKAGASQPACEEALVEASCHGQAGYAELLMSTDLIRPHVAVHALVTACCRGFVDVIRMLIKRGVDVNATDRVLLQSLKPSLHANVDCTALVAAVIHRQLPVVDLLLKNGARIDSEVRLGAWSWDISTGEELRVGAGLGEPYDIAWCAVEYFERSGAILRLILQHISSKNPHHGRTLLHHAVLCGNDEAVRALLEFGDSVESPVKTTNKAEFLPLHMASRLGFPTIIQCLIDFGCDLNSITDSGDTALIICAKYKQEECLKVLTRAGADFGLVNVSGQSACSIAEANKWSHGFQQALLDTIRKGKIPKSGNISVFSPLLFTAQAGDAEALKTLVESGEFDLDYQDERGFSAVMVTALNGHAESFRLLVYAGADVKLCNKYGETAITLSKLNQNCDLFEQVMLEFAIEKGNRNACGFYALHCAARRGDLDAVKLLTNKGYDVNAPDGEDYTPLMLAAREGHASICKLLISCGAHCNAKNSRGETPLLFARKSSGGAKNEAQAVILDELARKLVLHGSYVLKHTKCGKGSPHGKQIRMLGSAGVLCWGKSSSRNVICREAELGASSTLRRNRYKKGDADEPGMFRVLTNKNKEVHFVCDGGLEVAELWVRGIKLVTKEVYFVKGSIS 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02399 679 ProSiteProfiles Ankyrin repeat profile. 98 126 IPR002110 GO:0005515
Adu06g02399 679 ProSiteProfiles Ankyrin repeat profile. 501 533 IPR002110 GO:0005515
Adu06g02399 679 PANTHER ANKYRIN REPEAT-CONTAINING 26 673 - -
Adu06g02399 679 PANTHER ANKYRIN DOMAIN PROTEIN 26 673 - -
Adu06g02399 679 SMART ANK_2a 468 497 IPR002110 GO:0005515
Adu06g02399 679 SMART ANK_2a 367 397 IPR002110 GO:0005515
Adu06g02399 679 SMART ANK_2a 227 256 IPR002110 GO:0005515
Adu06g02399 679 SMART ANK_2a 94 123 IPR002110 GO:0005515
Adu06g02399 679 SMART ANK_2a 34 64 IPR002110 GO:0005515
Adu06g02399 679 SMART ANK_2a 501 530 IPR002110 GO:0005515
Adu06g02399 679 SMART ANK_2a 297 326 IPR002110 GO:0005515
Adu06g02399 679 SMART ANK_2a 264 293 IPR002110 GO:0005515
Adu06g02399 679 SMART ANK_2a 401 430 IPR002110 GO:0005515
Adu06g02399 679 SMART ANK_2a 140 169 IPR002110 GO:0005515
Adu06g02399 679 ProSiteProfiles Ankyrin repeat profile. 227 259 IPR002110 GO:0005515
Adu06g02399 679 Gene3D - 207 349 IPR036770 -
Adu06g02399 679 Gene3D - 455 560 IPR036770 -
Adu06g02399 679 ProSiteProfiles Ankyrin repeat region circular profile. 501 532 - -
Adu06g02399 679 ProSiteProfiles Ankyrin repeat region circular profile. 227 255 - -
Adu06g02399 679 ProSiteProfiles Ankyrin repeat profile. 264 296 IPR002110 GO:0005515
Adu06g02399 679 SUPERFAMILY Ankyrin repeat 25 169 IPR036770 -
Adu06g02399 679 Gene3D - 14 185 IPR036770 -
Adu06g02399 679 ProSiteProfiles Ankyrin repeat region circular profile. 468 499 - -
Adu06g02399 679 Gene3D - 350 454 IPR036770 -
Adu06g02399 679 ProSiteProfiles Ankyrin repeat profile. 401 433 IPR002110 GO:0005515
Adu06g02399 679 Pfam Ankyrin repeats (3 copies) 449 532 IPR002110 GO:0005515
Adu06g02399 679 Pfam Ankyrin repeats (3 copies) 211 293 IPR002110 GO:0005515
Adu06g02399 679 SUPERFAMILY Ankyrin repeat 223 543 IPR036770 -
Adu06g02399 679 ProSiteProfiles Ankyrin repeat profile. 468 500 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02399 Adu-Chr6 97678835 97685499 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02399 372 538 Ion Channels AT2G25600 28.743 1.39e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02399 - - adu:107494823 1256.12