Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02378 ATGCCGGAGGAAACCACGTCGATCGACTATGTCATGGAGGCAGCCTCGGGGCCACACTTCTCCGGTCTCCGCCTCGACGGCCTCCTCTCCTCCCCGCCTCTCAACCAGCCCTTCGTTATTGGTGTTTCTGGAGGTACTGCTTCTGGGAAGACCACTGTCTGCGACATGATTATTCAGCAGCTTCACGATCACCGCGTTGTTCTTGTCAATCAGGATTCATTTTACCGTGGTTTGAGACCTGAAGAGTTGGAAAGAGTTCACGAGTACAATTTTGATCATCCAGATGCCTTTGACACCGAACAGCTATTAGAGTGCATGAGAAAGCTTATTGCTGGCCAGAGTGTGCAGGTGCCAATTTATGACTTTAAGAAGCACCAACGGTGTTCAGATAGTTTTCGGCAGGTCAATGCTTCTGATGTCATTATATTGGAGGGAATTCTTGTATTCCATGATCAGGATGTCCGGGATTTAATGAACATGAAGATCTTTGTTGACACAGATGCTGATGTGAGACTAGCTCGTAGGATTAGACGTGACACAGTGGAGCGAGGGAGGGACATAAACTCTGTTCTTGAACAGTACGCAAAGTTTGTTAAGCCTGCCTTTGATGATTTTGTTCTACCGTCAAAGAAGTATGCTGATGTGATCATTCCTCGGGGAGGTGATAATCATGTTGCCATTGATTTGATCGTGCAACATATCCGCACAAAGCTTGGTCAACATGATCTGTGCAAAATATATCCAAATGTTTATGTTATTCAATCAACATTCCAGATAAGGGGGATGCATACATTGATTCGTGACAAAGACATATCAAAGCATGATTTCGTATTTTATTCTGATCGGCTTATTCGTCTGGTTGTTGAGCATGGTCTTGGTCATCTCCCATTCACCGAAAAGCAAGTCGTTACTCCAACAGGATCTGTCTACACTGGTGTTGATTTCTGCAAGAAACTATGCGGTGTTTCAATTGTTCGAAGTGGTGAGAGCATGGAGAATGCACTTCGCGCATGTTGTAAGGGCATTAAAATAGGGAAAATTCTGATTCATCGGGATGGAGACGATGGACAACAGCTTATATATGAGAAGCTTCCCAAGGATATTTCAGAACGGCATGTCTTGCTTCTCGATCCTGTCCTTGCTACAGGTAACTCCGCCAACCAAGCAATTGAGTTACTCATTCAGAAAGGAGTTCCAGAGTCCCACATTATATTCCTGAATCTCATTTCTGCTCCTGAGGGGATCCATTGTGTGTGTAAACGGTTTCCCTCACTGAAAATTGTCACATCTGAGATTGATGCCGCCTTAAACGATGAGTTTCGGGTTATCCCTGGATTGGGGGAGTTTGGGGATCGCTACTTTGGTACAGATGATTGA 1377 0.4488 MPEETTSIDYVMEAASGPHFSGLRLDGLLSSPPLNQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLRPEELERVHEYNFDHPDAFDTEQLLECMRKLIAGQSVQVPIYDFKKHQRCSDSFRQVNASDVIILEGILVFHDQDVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDKDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDDGQQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDAALNDEFRVIPGLGEFGDRYFGTDD 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02378 458 CDD UMPK 39 237 IPR000764 -
Adu06g02378 458 PRINTS Uridine kinase signature 37 54 - -
Adu06g02378 458 PRINTS Uridine kinase signature 67 78 - -
Adu06g02378 458 PRINTS Uridine kinase signature 112 127 - -
Adu06g02378 458 PRINTS Uridine kinase signature 169 179 - -
Adu06g02378 458 PRINTS Uridine kinase signature 183 194 - -
Adu06g02378 458 PRINTS Uridine kinase signature 205 218 - -
Adu06g02378 458 PANTHER URIDINE KINASE-LIKE PROTEIN 2, CHLOROPLASTIC 34 455 IPR029930 GO:0004849|GO:0044206
Adu06g02378 458 CDD PRTases_typeI 314 429 IPR000836 -
Adu06g02378 458 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 230 IPR027417 -
Adu06g02378 458 TIGRFAM udk: uridine kinase 38 237 IPR000764 -
Adu06g02378 458 Pfam Uracil phosphoribosyltransferase 255 456 - -
Adu06g02378 458 Gene3D - 34 240 IPR027417 -
Adu06g02378 458 SUPERFAMILY PRTase-like 240 457 IPR029057 -
Adu06g02378 458 Pfam Phosphoribulokinase / Uridine kinase family 39 225 IPR006083 GO:0005524|GO:0016301
Adu06g02378 458 PANTHER URIDINE KINASE 34 455 - -
Adu06g02378 458 Gene3D - 241 456 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02378 Adu-Chr6 97301159 97307972 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02378 1 458 PRT Gene Family AT5G40870 85.507 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02378 K00876 - gmx:100780005 862.062