Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02355 ATGATTATTTCAGAGGAGAAGATCTTGGAAATCTTAGTAGATTGTGATTGTAGTGGTTGGAAAATTCCGAAGATTGAAAGAAGTGGCAAGAACAAAAAGACGAAAAATGGAAGGCACATATGGCACTCCATGACACATGCTACAGTTGAAAGCTTTAAAAATGCATTGGTCTTAGAGCCAAATGATGAAACTGAGGACTCTGAGTGCCACAGTGAAGATGTTGAGGAAGAATCAGTGGGTGTTAAAAAGGCAGGTCCAACACGAGGTGTTAAGAGAAGTCGTTCAGCCGAAGTACATAATCTATCTGAAAGGAGGCGAAAAGACAGGATCAATGAGAAGATGCGTGCATTGCAAGATCTCATACCAAACTGCAATAAGCCGGCTTGA 387 0.4109 MIISEEKILEILVDCDCSGWKIPKIERSGKNKKTKNGRHIWHSMTHATVESFKNALVLEPNDETEDSECHSEDVEEESVGVKKAGPTRGVKRSRSAEVHNLSERRRKDRINEKMRALQDLIPNCNKPA 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02355 128 MobiDBLite consensus disorder prediction 61 106 - -
Adu06g02355 128 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 94 128 IPR011598 GO:0046983
Adu06g02355 128 PANTHER TRANSCRIPTION FACTOR PIF3 62 126 - -
Adu06g02355 128 MobiDBLite consensus disorder prediction 90 106 - -
Adu06g02355 128 PANTHER TRANSCRIPTION FACTOR PIF3 62 126 IPR044273 GO:0003700|GO:0006355
Adu06g02355 128 Pfam Helix-loop-helix DNA-binding domain 98 123 IPR011598 GO:0046983
Adu06g02355 128 Gene3D - 90 128 IPR036638 GO:0046983
Adu06g02355 128 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 93 126 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02355 Adu-Chr6 96841226 96842692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02355 65 126 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 78.788 3.71e-25 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu06g02355 HLH 9.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02355 K12126 - mnt:21405471 113.235