Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02328 ATGAAGTTTAGGACTTTTGAGGTCACCCTTCTTCAATCAAAGAGGACCGGACGGACCCATCATTTCCCCTTTTCTTTTTTATTAATTCTTTTTTCTTTACTTTCTCTCTTTCCCCCACACAAACACACACTGTTCATGGATCCCAAGGGCTCAAAGCAGCCACAGGAGTCACCGCAACCACCACCAACAAACAACACCATGGGAGAGAACAAGGCATCAGAAGTGAAGGATTTCCAGATTGTGGTATCAGAGAAAGAAGAGAACAAGAAACAGGTCTCACAGCAGTTAGCGCCAAAGAGAAGCTCCAACAAAGACAGACACACAAAGGTGGAAGGAAGAGGAAGAAGGATAAGGATGCCGGCGCTGTGTGCAGCAAGGATCTTCCAGTTGACCAGAGAATTAGGCCACAAATCTGACGGCGAAACAATCCAGTGGCTCCTCCAACAAGCCGAGCCTTCAATAATAGCCGCAACCGGCACCGGAACAATCCCGGCTTCCGCTCTCGCTGCGGCAGGAAACTCCATCTCTTCGCACCAGTCAGCAACCCAATCTCTTTCCGCAGGTTTACACCAAAAGATTGACGAATTAGGAGGGTCCAGCAGTAGGACCAGTTGGGCAACAATGGTTGGTGTTGGGAATTTAGTTGGAAGACCCCATCATCATCATCATCAAGTGGCCGCAGCCGCCACAGCAGGGTTATGGCCCCACCATCACGAGGGATCATCAAATTACCTTCAAAAGATTGGGTTCCCGGGGTTTGACTTTTCAGTTCCCTCTGGTGCTGCTGCGGGTGGTGGTGGCGGCATGGGTCCGATGAGCTTTACATCAATTTTGGGTGGTTCACAACAACAGATGCCTGGTTTGGAGCTTGGTTTGTCGCAAGATGGACATATTGGGGTCATAAATCCACAGGCCTTGACTCAGATTTACCAGCAGATGGGTCAGGCTAGGGTGCACCAGGACCATCAAGAACACCAACACCACCACCATCACCACCAGCAGACTCCTCCTTCTAAGGATGATTCTCAAGGCTCTGGACAGTAG 1044 0.499 MKFRTFEVTLLQSKRTGRTHHFPFSFLLILFSLLSLFPPHKHTLFMDPKGSKQPQESPQPPPTNNTMGENKASEVKDFQIVVSEKEENKKQVSQQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGNSISSHQSATQSLSAGLHQKIDELGGSSSRTSWATMVGVGNLVGRPHHHHHQVAAAATAGLWPHHHEGSSNYLQKIGFPGFDFSVPSGAAAGGGGGMGPMSFTSILGGSQQQMPGLELGLSQDGHIGVINPQALTQIYQQMGQARVHQDHQEHQHHHHHHQQTPPSKDDSQGSGQ 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02328 347 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 69 346 IPR005333 GO:0003700
Adu06g02328 347 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 69 346 - -
Adu06g02328 347 MobiDBLite consensus disorder prediction 45 71 - -
Adu06g02328 347 MobiDBLite consensus disorder prediction 313 347 - -
Adu06g02328 347 ProSiteProfiles TCP domain profile. 103 157 IPR017887 -
Adu06g02328 347 MobiDBLite consensus disorder prediction 85 112 - -
Adu06g02328 347 Pfam TCP family transcription factor 102 197 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02328 Adu-Chr6 95966126 95967934 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02328 69 347 TCP Transcription Factor Family AT3G27010 56.766 1.27e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu06g02328 TCP 1.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02328 - - aip:107604999 603.594