Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02308 ATGGGTCATTGCCCATGTTTTGGGTTTAGAAAGAAGGCCAATAGAGGAGAGAAGCTCAAGTTTCAACAAGAGGAACATAGCAAAGTTATCGAGAAGAAACTCCATTCTCCACACAATGTTTCTGCTGAAAAACCTTCAGGACTATTAACACCTGAGGCAACTTTTGCAACAAAGGAGATTGACCATTCTAATAACAAGGCTCATATATTTACCTTCCGAGAGCTTGCAACAGCAACAAAAAATTTTAGGGATGAAACATTTATTGGGCAAGGTGGATTTGGAACTGTTTACAAAGGAAAGCTAGGTAAACTAAATCAGCAGGTTGTAGCTGTAAAACGACTTGATACAAGTGGTGCCCAAGGGGAGAAAGAATTCTTAGTGGAGGTTCTGATGTTGTCTCTTTTACGTCATCCAAACCTTGTTAATTTGATTGGTTACTGTGCTGAAGGTGATCAACGTCTTCTTGTCTACGATTACATGCCTATGGGATCCTTAGAATCTCGTCTCCATGATCTGCCACATGATAAAGAAGCTCTTGATTGGAATACAAGAATGAAGATAgcaacaggggcagcaaaaggaataaattatctacacaatgaagcaaaaccatcggttatatacagggatctaaaatcatcaaacatacttttagacaaggggtttgttccaaaactttctgattttgggcttgcaaaatttgGGCCAACCGGAGACCAATCATATGTTGACACGAGGGTGATGGGAACACATGGTTATTGTGCCCCTGAATATGCCACAAGTGGGAAATTAACCAGGAGATCTGACATATATAGTTTTGGGGTTTTGTTGTTAGAGCTTATAACTGGACGCAGAGCTTATGATGAGAATCGTGGCCATGACAAGCATCTTGTTGATTGGGCACGACCAAAGTTTAAAGATAGAAAGAATTATTCAAAATTGGCAGATCCAAAACTAGAAGATCATTATTCTGGATCCGGACTAACAATGGCAATTGAATTGGCATCCATGTGTCTCAGAGAAGAGCCACGTCAACGGCCGGACGCGGCGGACATAGTGATCGCTCTCGATTTCTTGTCTTCCAAGCAATACGTTCAGAGAGTACCTATCGATTTTGATGAGAAAGACAAATATACCAATGACTCTCCAAAAGCAATAATGACAGTTTTGACTAAAGATGTTCAAAGAGAGGAAGCTGTTGCAGAAGCCAAACTATGGGGTAAAACATGGAGAGATAGAAAACAAAATGACCAAAGTAGCCTTGAGGAAATAAATAGGTAG 1281 0.3614 MGHCPCFGFRKKANRGEKLKFQQEEHSKVIEKKLHSPHNVSAEKPSGLLTPEATFATKEIDHSNNKAHIFTFRELATATKNFRDETFIGQGGFGTVYKGKLGKLNQQVVAVKRLDTSGAQGEKEFLVEVLMLSLLRHPNLVNLIGYCAEGDQRLLVYDYMPMGSLESRLHDLPHDKEALDWNTRMKIATGAAKGINYLHNEAKPSVIYRDLKSSNILLDKGFVPKLSDFGLAKFGPTGDQSYVDTRVMGTHGYCAPEYATSGKLTRRSDIYSFGVLLLELITGRRAYDENRGHDKHLVDWARPKFKDRKNYSKLADPKLEDHYSGSGLTMAIELASMCLREEPRQRPDAADIVIALDFLSSKQYVQRVPIDFDEKDKYTNDSPKAIMTVLTKDVQREEAVAEAKLWGKTWRDRKQNDQSSLEEINR 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02308 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Adu06g02308 426 CDD STKc_IRAK 88 353 - -
Adu06g02308 426 PANTHER OS07G0668900 PROTEIN 5 367 - -
Adu06g02308 426 ProSiteProfiles Protein kinase domain profile. 82 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g02308 426 PANTHER OS07G0668900 PROTEIN 5 367 - -
Adu06g02308 426 ProSitePatterns Protein kinases ATP-binding region signature. 88 112 IPR017441 GO:0005524
Adu06g02308 426 Pfam Protein kinase domain 83 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g02308 426 Gene3D Phosphorylase Kinase; domain 1 48 159 - -
Adu06g02308 426 SUPERFAMILY Protein kinase-like (PK-like) 64 358 IPR011009 -
Adu06g02308 426 SMART serkin_6 82 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g02308 426 Gene3D Transferase(Phosphotransferase) domain 1 160 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02308 Adu-Chr6 95410145 95421165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02308 63 420 Glycoside Hydrolase AT3G07070 55.096 1.52e-131 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Adu06g02308 Pkinase 2.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02308 K13430 - gmx:100809298 560.066