Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02296 ATGAGTAGACCTTCAAGGCAATTGGAGAAATTAGGGTTCATCTTGAAATTGTGCACACAGTTGCGGGAGGTGGTCGTAGGCCATCCCCACCGCCTGTTTTTAGATGTGGATTCATTGAGAAAAGTTTGGGCGAAGGAGAGGCTCGTTGATCGAGGCGATGTCACCAGACACTATGTGTATGGCATGCTTTGTTCTTCAATGGCTTCTTTTTTGTTTAATCCAGGGATGTCTGATAGTGAGTCAGATTTGGACGATGGTAGCACGTCAGAGTTGTCAGGCCAGTGGACTGATGGTTGGAGTATCGATTCAAGGGACGGGGATGATTCGAATGGGTTGAAGGAACCGCCGACTGAGGAAGGGGATAGTGGCCTTGCCGACAAATTTAATGGGGTTGGAGATGCGTATGCAAGCTATATCGCATATACAAAGGTTATTGATTTTGCGGTGCGAAAGGGAGATTATATTAAAGATGAGGAGGAAAATATTGTCAGGAAGTTTTTCTACTGCAATCGGCAAGGGCTGCGTGAAAAGAAGTACTACGAGAGAGTTGACAGAAAAAGGCCTCATAAACCAGAGACGAGAACGAATTGCAATGCCAAGCTTGTGGTGTTTCCGGACAAAAGTTGTGGAAAGTGGCAGATGAAAACATTGGTCAAGGATCATAATCACGACTTGGCGCCCCAAGAGTGCACTAATGTAATGGCTCCACATGAGAAGATCACAGAAGGGCACAAAGCGCATATACATTGCATGCATGAAGCCGGattacaagactctttactcaaatccggtgatgacaacgggtctcgaaacattggaaagatctgcGAGCAAGTTCTACACAAGGGAGATATTCTACGAGGTGCAAAATTAGATCGAGGGGTTGCGGCATTGTTAGTCTTGCACAGGGACAGTATTGGTAGTACCGAGAAGTTCATGTTCCGAAAGTATCGAAAGCCCCATCATGTGTACTCAATTTTCATGGATAGAAGTTGTGATAAGTATGCATATTCTTATGCCAAGGTTGCCGATAGCAGTAGTCAAGATGCGTCAGTCGATCCCATAGATGGATTTTCCATTAGATATGGCACATTATGGAGTGCCTGCCCGTTGCTGTGTTTGATAGCCTTGCAATGCACGGAAACATACAACACTGCCATAATAGAGGTCCAAGGTGCACCTCGTGGGAGCACAAATGCTGATAACGGGAGACATTGTAGGCAGTGCCTCGAATTAGACCATGACCGAAGAAATTGCACTGCCATAGACGACGATACCGTCGATGAGGATGGCGGATCCAGCCATAGGCCAGTTCATTATTCCGGAAAGAGGTCACAATGA 1341 0.4392 MSRPSRQLEKLGFILKLCTQLREVVVGHPHRLFLDVDSLRKVWAKERLVDRGDVTRHYVYGMLCSSMASFLFNPGMSDSESDLDDGSTSELSGQWTDGWSIDSRDGDDSNGLKEPPTEEGDSGLADKFNGVGDAYASYIAYTKVIDFAVRKGDYIKDEEENIVRKFFYCNRQGLREKKYYERVDRKRPHKPETRTNCNAKLVVFPDKSCGKWQMKTLVKDHNHDLAPQECTNVMAPHEKITEGHKAHIHCMHEAGLQDSLLKSGDDNGSRNIGKICEQVLHKGDILRGAKLDRGVAALLVLHRDSIGSTEKFMFRKYRKPHHVYSIFMDRSCDKYAYSYAKVADSSSQDASVDPIDGFSIRYGTLWSACPLLCLIALQCTETYNTAIIEVQGAPRGSTNADNGRHCRQCLELDHDRRNCTAIDDDTVDEDGGSSHRPVHYSGKRSQ 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02296 446 MobiDBLite consensus disorder prediction 81 99 - -
Adu06g02296 446 MobiDBLite consensus disorder prediction 101 121 - -
Adu06g02296 446 MobiDBLite consensus disorder prediction 425 446 - -
Adu06g02296 446 Pfam FAR1 DNA-binding domain 138 226 IPR004330 -
Adu06g02296 446 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 127 233 - -
Adu06g02296 446 MobiDBLite consensus disorder prediction 81 125 - -
Adu06g02296 446 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 127 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02296 Adu-Chr6 95025514 95029017 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu06g02296 FAR1 8.2e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02296 - - aip:107610720 288.115