Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02288 ATGTTCATCAGAAAGTTATGCAACATAGTCGAAGACATTTTCACGGAGCGAAACGACCCGCCTATATGGAGTAGTGAGTTGGAACGACATTTCGGTGGATCGTACTCCTATGCTTGCATGAGAGCTCGACCTAGATGCCAACTTGAGTTCAGTCATCTAGAGCTTGGCTCCAGAGCAACTTTCGTAGGGATTTATGATAGCCACAATGGTCCCGAGGTGGCTTCGCATGCTTATGAGAATCTTTTTTATCATTTAATTGTCGATGAAGAAAAGATAACTCAAGCAGTAGATACCATGGAGAACCAAATTATAGCGCTTTCAAGGGAGGATATAACCCAAAAGTTTGCCACTGTTGGATCATGTTACTTGATTGTTTTAAAATACAAGGACTTACTTTATGTTAGAAATCTTGGTGACGAAAAATGCGTTCTTGGACGGGATGCGTATCTCAAGTATGATAATTGTGTAGTTCAAGCTACCGATTTAGTGCGTTTTCATATTCTAGGACCAACGAGTAGGCCTTACCTTACTGTTAAAGTGCAAATCCCAACACAGACAGGTAGACTCCTTAGCAAGCCAGCAAAATTTGTCATAATTGCTTCAAATGGCCTTTGGGACTTTTTGTTCAATGAAGAAGCGACGAAAATCGTCCAAACTCATCTGAAAATGGGGATTGCACGTATACTGATGCAGGAGGCACAAAAGGTGGCAGCGAGAATTAATCGCTACGCATACATCAATCATCGAAACAATACAAATAATCGAAATGAGGTCTACGATGATATGACAGCCGTAGTAGTTTTTTTAAATTCTAAAAAATTAATCCGGAGGAACGAGGCAATACCAAAGGTATCTGTGCAAGCATTCAGTGAAGCCAATCAAAATTTAAGGTTCGCAGCTGTAGATGAGTTAATGCCTTAA 921 0.4039 MFIRKLCNIVEDIFTERNDPPIWSSELERHFGGSYSYACMRARPRCQLEFSHLELGSRATFVGIYDSHNGPEVASHAYENLFYHLIVDEEKITQAVDTMENQIIALSREDITQKFATVGSCYLIVLKYKDLLYVRNLGDEKCVLGRDAYLKYDNCVVQATDLVRFHILGPTSRPYLTVKVQIPTQTGRLLSKPAKFVIIASNGLWDFLFNEEATKIVQTHLKMGIARILMQEAQKVAARINRYAYINHRNNTNNRNEVYDDMTAVVVFLNSKKLIRRNEAIPKVSVQAFSEANQNLRFAAVDELMP 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02288 306 CDD PP2Cc 54 269 IPR001932 -
Adu06g02288 306 Coils Coil 89 109 - -
Adu06g02288 306 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 17 146 - -
Adu06g02288 306 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 147 290 - -
Adu06g02288 306 ProSiteProfiles PPM-type phosphatase domain profile. 34 269 IPR001932 -
Adu06g02288 306 PANTHER ALPHABET, ISOFORM E-RELATED 17 146 - -
Adu06g02288 306 PANTHER ALPHABET, ISOFORM E-RELATED 147 290 - -
Adu06g02288 306 Gene3D - 165 279 IPR036457 -
Adu06g02288 306 SUPERFAMILY PP2C-like 49 271 IPR036457 -
Adu06g02288 306 Pfam Protein phosphatase 2C 183 238 IPR001932 -
Adu06g02288 306 Pfam Protein phosphatase 2C 54 147 IPR001932 -
Adu06g02288 306 Gene3D - 33 164 IPR036457 -
Adu06g02288 306 SMART PP2C_4 24 267 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02288 Adu-Chr6 94837914 94839186 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02288 15 274 PP2C-type Phosphatase Gene Family AT3G51370 27.327 6.30e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02288 K01102 - adu:107494665 175.252