Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02275 ATGATGTTGCTACCGTGCGACTACTGCGATTCCAAAACGGCAGTTCTCTTTTGCCGCGCCGACTCTGCCAAGCTCTGCATCTCATGTGATCAGCACGTGCACTCCGCCAACGCCCTCTCACTCAAGCACGTGCGCTCTCAGATTTGCGATAACTGCCGCAACGAACCTGCAGCCGTGCGATGCGCCACCGACAATCTCGTCCTCTGCAACGACTGCGACTCCGACGCACACAACAGTTCCTCCGTCGCCTCCTCCCTCCACGCCCGCCACCGCCTCCATGGCTTCTCCGGCTGTCCCCCCGCCCTCGAAATCGCCGCCGCCTTAGGGATCGAGCTCAAGTTCAACTCTAACTGCAACGGCGGCTCTGGTAACACTTCTGGATTCGACGAGATTAAAGGTCCGGTGGTGCCGATCGTGAAGGACAAGGTGTATGAGCAGGTGCTGGAGATGGCGAGAAGGAACGGCACGGCGGCGGATCGAAACGAAGAAGTTGAAGCTGGATTGTGCCCTGATACGCCGCCGTGCGTTCAGGGTGCTGAGGAGAAGGGTGAATTGAATACTTGTAACAGTTTTAGTAACAATAAGAGGAGTGCGAATCGTAACAACAACAATAACAAGAACAACGATGATGAGTTGTTGATGGAGCAAACGCCGTTCACTTCTTTGTTGATGCTGCCTTCTGATGGCGGAAGCGTGAAGAGAAATGATTGCGGCAGTGAAGGGGATCTTCTCTGGAATAATTGCAATCCTGCGTATCAGCCTCCTCAGGTATGGGATTTTCAGTTAAAAAACATTGCAAGATGTGCACAATATCAACTCCTCAACAATTGA 831 0.5307 MMLLPCDYCDSKTAVLFCRADSAKLCISCDQHVHSANALSLKHVRSQICDNCRNEPAAVRCATDNLVLCNDCDSDAHNSSSVASSLHARHRLHGFSGCPPALEIAAALGIELKFNSNCNGGSGNTSGFDEIKGPVVPIVKDKVYEQVLEMARRNGTAADRNEEVEAGLCPDTPPCVQGAEEKGELNTCNSFSNNKRSANRNNNNNKNNDDELLMEQTPFTSLLMLPSDGGSVKRNDCGSEGDLLWNNCNPAYQPPQVWDFQLKNIARCAQYQLLNN 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02275 276 SMART bboxneu5 1 48 IPR000315 GO:0008270
Adu06g02275 276 SMART bboxneu5 49 85 IPR000315 GO:0008270
Adu06g02275 276 CDD Bbox1_BBX-like 5 48 - -
Adu06g02275 276 Pfam B-box zinc finger 46 90 IPR000315 GO:0008270
Adu06g02275 276 Pfam B-box zinc finger 5 45 IPR000315 GO:0008270
Adu06g02275 276 ProSiteProfiles Zinc finger B-box type profile. 44 95 IPR000315 GO:0008270
Adu06g02275 276 MobiDBLite consensus disorder prediction 190 211 - -
Adu06g02275 276 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 269 - -
Adu06g02275 276 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 14-LIKE 4 269 - -
Adu06g02275 276 ProSiteProfiles Zinc finger B-box type profile. 6 48 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02275 Adu-Chr6 94526343 94530707 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02275 3 113 C2C2-CO-like Transcription Factor Family AT2G33500 64.865 5.87e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Adu06g02275 zf-B_box 7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02275 - - ahf:112697135 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02275 06 94526343 94530707 Adu06g02275 06 94526343 94530707 ECH