Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02244 ATGTCCATCTTGCCCTCACAAGCCCAGCCAGCACCATCGTCTTCTTCATCTCCTTCAACTTCAAACCCTAATTCCCAATATGGATTCCCGAATTCTCTTCCCTCTTCCTCAATTTCCTCTCTCTCTTCGCAATTCAACAACTTCGACAGCAACATCGATGCTTCTTTCGGATCCCTTCGAATCTCTGATCCCCAATCTCCCTGCCACCATCCAGGTTCATCAACTCAAGCTACAGAAGATTCTCGTGGACCTTCCGAAAAGGTGATGGAGTCGGTGTCTGCAAGTGGTATAAGTTCTTCTTCACCTTCACAAAACTCTGGAATACATTCTAGGAGTCACGCTGGAAAACGAGCAGGTGGNNATAGACATCAACAGAATCCTGTGTCTGCAAATTATCCTGGAAGTTCCCCTCCACTGGGAAGGAGATCTCAGATGGTGAATGGCAATTACTTGCTGAATTTTCAGTATGATCCAATATCCCGTTCTCAACCAAGAGGGCCTCCACCTCCTCTTCCAAGAAGGCAACGGAAGAGAAGGCCATACAACAAGGATTTGTTTCTGCAGGCAAATTACAGATTCATGGTCCTAGATACAGGAAATTATTCTCCCCAGTCGATGGATCCAGATAAAATGTTGCAGTGGGAGGATATTATATGTGTGACATATTCAACCCCCTTCCCAGTTCAGTGCCCAATTTGTTTGGAGTATCCTCTGTGTCCCCAGATAACCTCATGCGGGCATATTTTTTGTTTCCCATGTATACTACAGTACTTGATGCTGGGTGAAGAGGATCACAAAGGTGATTGCTGGAAAAGGTGTCCTTTATGCTTTGTGATGATATCTGTCAAGGATTTGTATACTGTCCACATAACAAATGTCAAACAATATCAAGTAGGGGATAATATTGAGTTCACATTTTTAACACGAAAAAAGGATTCATTTACTTTATCTCATAAAAATAAACAAGAGACAGATATTGCATCAAGTAGCAATGGAGATTTATGTGATCCGTTTTCCAAGTTCACACTCACATCAGATGTAGATCTCTCTGTTAGACACGCAATATCAGATCTAGATGGCTGGCTGGCCAGAGCTGATTCAGGGCTTGTCGATGACCTGGAGAAGCTTCCATATGTTTGTGCTGCAATGCAACAACTAAAACAAAGGAAGAAATATTGGAATGAACATAGGGCTTCTGACATTTCTTCAAGGCTTATTGATTCTGAACATCAGATACAATTGACAGCTGCAAATGCTGTGGATGCTGATGGTGAAACCCATTCTAATGGATCAAGGATTTCCACTGTAGATTTCCAGGACCAAAGTAAGGGAATAATATTGGATAAGTCAACTGCTGAAGCCTGTCCACATCAAACTTTGGATGGAGAGAAATTGATAGAACAAGAAATCAATCCATCCTCATCATATGAGGAGAAGAATGGTGTTCAAAGGCATTCAAATGGAATTGGAGAGACGAAGGAAAGTGATTCTTACAATTTCTTTCAGGCTGTGGATGGCCAGCATATAATTCTCCATCCACTGAACACGAAATGTTTACTTCATCATTATGGGAGTTATGACATGCTTCCACACAGAATAACGGGAAAGATTCTGCAAATGGAAACGGTTACCCAGTCCGAGGCCATGAGGAGGCGATATAAATTCTTAAGTCATTTTCCGTTGACAACAACTTTTCAGCTGTGTGAAATTGATTTGAGTGAGATGTTGCCTCCTGAAGCACTGGCCCCATTTATGGATGAAATAAAGAAGCGTGCACACCAGAGGAAACAACTCGCAAAGAAGGAGCAAAAGGAAAAATTCAAGGCGGAAGCTGCTGCCGCTTATTCTTTTCCCATTCCAAGTTATAAACTTGCTTCGTATGATGACACTCCAACATTTTCTATGGATGACTTTGAAGCCTTGGGAAATTCAGCTATGTCATCAAGTCCTCCAGTTGTTGGGGAAAGAAAAACATTCTCAAATGTTACCCGGCTTGGATTCGCCGCTGCTCATGATTCTCCATCCTTACAAATCCAAGAAACCAGCAGTACCCATAATAACAATACGGTCACTAGTCCTACTGGCACAACAGGTCCAAGAAATGTGGAGACACCATCATATTCCAATGTTACATCCAGAGCCGAATCAAATGTAAACATGAATGCATCAAACACAAATGACTTTGGGAAGAAGCGGAAAAAGCAAAATCGAGTTCTCCTATCGACATCTGGTGGCAGGCGTTACTGA 2247 0.4219 MSILPSQAQPAPSSSSSPSTSNPNSQYGFPNSLPSSSISSLSSQFNNFDSNIDASFGSLRISDPQSPCHHPGSSTQATEDSRGPSEKVMESVSASGISSSSPSQNSGIHSRSHAGKRAGXXRHQQNPVSANYPGSSPPLGRRSQMVNGNYLLNFQYDPISRSQPRGPPPPLPRRQRKRRPYNKDLFLQANYRFMVLDTGNYSPQSMDPDKMLQWEDIICVTYSTPFPVQCPICLEYPLCPQITSCGHIFCFPCILQYLMLGEEDHKGDCWKRCPLCFVMISVKDLYTVHITNVKQYQVGDNIEFTFLTRKKDSFTLSHKNKQETDIASSSNGDLCDPFSKFTLTSDVDLSVRHAISDLDGWLARADSGLVDDLEKLPYVCAAMQQLKQRKKYWNEHRASDISSRLIDSEHQIQLTAANAVDADGETHSNGSRISTVDFQDQSKGIILDKSTAEACPHQTLDGEKLIEQEINPSSSYEEKNGVQRHSNGIGETKESDSYNFFQAVDGQHIILHPLNTKCLLHHYGSYDMLPHRITGKILQMETVTQSEAMRRRYKFLSHFPLTTTFQLCEIDLSEMLPPEALAPFMDEIKKRAHQRKQLAKKEQKEKFKAEAAAAYSFPIPSYKLASYDDTPTFSMDDFEALGNSAMSSSPPVVGERKTFSNVTRLGFAAAHDSPSLQIQETSSTHNNNTVTSPTGTTGPRNVETPSYSNVTSRAESNVNMNASNTNDFGKKRKKQNRVLLSTSGGRRY 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02244 748 MobiDBLite consensus disorder prediction 674 726 - -
Adu06g02244 748 MobiDBLite consensus disorder prediction 91 111 - -
Adu06g02244 748 SUPERFAMILY RING/U-box 229 283 - -
Adu06g02244 748 ProSiteProfiles Zinc finger RING-type profile. 230 276 IPR001841 -
Adu06g02244 748 ProSitePatterns Zinc finger RING-type signature. 245 254 IPR017907 -
Adu06g02244 748 MobiDBLite consensus disorder prediction 1 144 - -
Adu06g02244 748 Coils Coil 585 605 - -
Adu06g02244 748 MobiDBLite consensus disorder prediction 157 179 - -
Adu06g02244 748 Pfam Zinc finger, C3HC4 type (RING finger) 230 276 IPR018957 GO:0046872
Adu06g02244 748 MobiDBLite consensus disorder prediction 1 82 - -
Adu06g02244 748 MobiDBLite consensus disorder prediction 671 748 - -
Adu06g02244 748 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 223 327 IPR013083 -
Adu06g02244 748 SMART ring_2 230 276 IPR001841 -
Adu06g02244 748 MobiDBLite consensus disorder prediction 472 491 - -
Adu06g02244 748 CDD RING-HC_RNF10 230 277 - -
Adu06g02244 748 MobiDBLite consensus disorder prediction 124 144 - -
Adu06g02244 748 PANTHER RING FINGER 10 FAMILY MEMBER 98 745 IPR039739 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02244 114 698 C3H Transcription Factor Family AT3G26730 56.811 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02244 - - adu:107494651 1387.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02244 06 93632459 93640404 Adu06g02244 06 93632459 93640404 ECH