Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02242 ATGCTTCCTGCAAGTATTCAAACCAAAGGAAATCAAATCTACTTTACAGATAACCTACTAAAATTGAAAGCAGTGGACTATGCGGAACATCAAGATATTGGCATCTTCGACTTGGACGATGGAAGTTGTCAGAGACTATTATCCGATGTAAAGTTCATGTGTCCTCCTATCTGGTGGCACTCCCTCCCTTATTTTCAACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCACTCCCAAATACCCAAGAAGAAGAAAGACCAGACCTTTTCCCTTGCTGATTTTACTGCCACCAAAACCGACTACCAAGATCCCATCGTGCTCCCCATCGGTCCGCGCCAGCGCACCGCCGAGGAGCTCGACCGCGACCGTAACCGTCTTGGCGGCGGCTTCAGGAACTACGGCGGTGACTGCGCCAACAGAAGCTCCGGTGGTGGTGATGACTCCTCCAATTCGAGGTGGGGTTCCTCTAGGGAGGGTGCTGGTAATGGTAATGTGGTGAAACCAAAAGGTCCAAGCCCATTCGGCGAGGCAAGACCGAGGGAGGAGGTGCTGGCGGAGAAGGGGCAGGATTGGAAGAAGTTTGATGAGCAGCTTGAGAGCATGAAGATCAAGTCTCCAACCAAGTATGGGCGGCAACCACCACCAGTGTTAGAGGAAGAGTATGTGAAAGAGGTCCTATCAAAAACACCCATTGCCAAACGAAATCAAGTTCCAAATTTGAAGTCAGAATTGGACACCCTTCTGTCTCCTCTTCAAAACCCTAATGAAAAAATCGAATCAAAGAACCCACATCCCATTCCCAACCCCATTATCATCAACAAAAAAGAAGGTGAAGTCTCAGAGGTAGTGTCTCAGCTCTCAGAAGAACCATGCAGCATCAGCAGAAGCTTCTTCACCGCTACCACAGTTACGGAGAAGAGAGAAGAAGAAGTAACCAGCAAAAGAAGCATCAGGGAGGAAACAACAACAATGATGAAGAATCATAAGTGGAACAACAACAGATCCCCGTCGAGGAAGCGCCCTCACACCTGTGATGGCAATGTCACCTCCGGGAGGAAGCAGAGTGTTGAGGAAGAATGGGCCAGAGTGGGTCGCCTGCTCGGCATGTTTGGATTAGGAGTAAAACCTTCTCAGGTTACCCGTATTCCATGTTCTTGGGACTTCCTTACCATCGAGTCTTTCCAACTTGTAGGCGCCCTTACCAATCGCCTCTTTGACCATGTAGGGGCCCTCCCAGTGCATGTTGGATCCTGTAACTTTGAACTGctttag 1278 0.489 MLPASIQTKGNQIYFTDNLLKLKAVDYAEHQDIGIFDLDDGSCQRLLSDVKFMCPPIWWHSLPYFQPLSLSLSLSLSLHSQIPKKKKDQTFSLADFTATKTDYQDPIVLPIGPRQRTAEELDRDRNRLGGGFRNYGGDCANRSSGGGDDSSNSRWGSSREGAGNGNVVKPKGPSPFGEARPREEVLAEKGQDWKKFDEQLESMKIKSPTKYGRQPPPVLEEEYVKEVLSKTPIAKRNQVPNLKSELDTLLSPLQNPNEKIESKNPHPIPNPIIINKKEGEVSEVVSQLSEEPCSISRSFFTATTVTEKREEEVTSKRSIREETTTMMKNHKWNNNRSPSRKRPHTCDGNVTSGRKQSVEEEWARVGRLLGMFGLGVKPSQVTRIPCSWDFLTIESFQLVGALTNRLFDHVGALPVHVGSCNFELL 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02242 425 MobiDBLite consensus disorder prediction 176 193 - -
Adu06g02242 425 MobiDBLite consensus disorder prediction 111 193 - -
Adu06g02242 425 MobiDBLite consensus disorder prediction 144 160 - -
Adu06g02242 425 MobiDBLite consensus disorder prediction 330 353 - -
Adu06g02242 425 PANTHER OS05G0503100 PROTEIN-RELATED 201 357 - -
Adu06g02242 425 Pfam Plant specific eukaryotic initiation factor 4B 80 159 IPR010433 GO:0003743
Adu06g02242 425 Pfam Plant specific eukaryotic initiation factor 4B 166 209 IPR010433 GO:0003743
Adu06g02242 425 PANTHER BNAC01G20710D PROTEIN 201 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02242 Adu-Chr6 93551565 93562972 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02242 141 206 Eukaryotic Initiation Factors Gene Family AT4G38710 42.857 2.51e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02242 - - ahf:112795348 187.578