Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02235 ATGGGGAGTGATTGCATCGCGTATATTGTTgTGGAGCCTATTATTAATAACACGGGACGAAACATTGCGTCTTCTCGTTTTCTCTCTCCCTTGACAACACTCTCTCTGCATTCTCTCTTTCCTTCTCCCCAAACCCTAGGAGCTTCTAATCCAAGCTACACTTCGAGATTTGCATGCTTGCAGGTTGAAGGTGCAGTTGCGCTTATTCAGAACTCAATCGTGCTCGGCGGCGTTTATTCTCAATATTCGATGGTTCCGAAGACGGAAAAGAGCTCTGATTTCGAAATGCCGGCGAGGAACAGTGACGAAACGGTAGAGAAGAAGAACGTGGCGAAGGACATGTCGGTGCAGCGCAGAGCCAGTGCGAGAATCCAAGCGGCGAAGCAGAAGGCCGAGGAGGAGCTTCATGCTCGCCGTGGAGCGGTGGTAGTAGAAGAAGAGAAAGAAAAAGAGGAGAAACGTGTGAAAGTGGCGAAGAAGTGGAGCAAGAAGCGCGTGAGGAATGGGGAGTACTTGGGAGAGGGAGAGGTTGTTGTTGGCGTTGCTTCCCCAAAGAAGGGGAACAATGGCAGCGGAAACGAGGATGGTGTTGGCGAGGGAGAGGGAGGTGTTGCTTCTTCCTTGGCGAAGAAGCCGAATAGGCGCCCGTTTATGCAGGATCAAAATGGAGTAGGGGATTCTGAGAATGCTGTGGCTAATTCTGCTGAAAATAAAGGAGCTGCCTTAAGGGTGAAGGAGACTATTAGGGTCTACAACAAGCATTACCTTCATTTTGTTCAGGAGGAAGAGAAGAGGTGTGGGAAAGCGAAGGCTGAATCTGAAGCTGCTAAGAAGTCAAAGTCTTCAAAATCGAAGAAAGCGGGACCACTTGAAGTTAAGAAAACTCATCAGCGACCTGATCTAAAGGCACTATCCATGATGATGACGAATAATGAGATTTTGTACCCCGAGAAAAGAATTGGTGACCTTCCAGGTATTGAAGCTGGACATCAGTTCTTTTCTCGAGGTGAAATGGTTGCTGTTGGTTTTCATAGTCATTGGTTAAATGGGATTGATTATATGGGCAAATCCTATGGCAAAGTGAACAGCATTTATGAATACCCTATTGCCGTGGCCATTGTTTTGTCGGGCCAGTATGAAGATGATGTTGATAATGCTGATGATGTTGTGTATACTGGTCAAGGTGGGCATAACTTGACAGGTGATAAGCGCCAAATCAACGACCAAAAGTTGGAGCGGGGTAACTTAGCACTCAAGAATTGCATAGAGCAAGATGTGCCTGTTAGAGTGATCCGTGGTCATAAATCTTCAAACGGTAAATCTTCAAACGGTAAATCTTCAAATGGTGCTACTAAAATCTATACATATGATGGCTTGTACAAGGTGATCAAGTATTGGGCAGAGAAGGGAATATCTGGATTTACAGTCTACAAATTTCAACTTAAGAGAATTGAAGGGCAGCCATTAATGACCACAAATCAGGTTTATTTCACTCGTGGACGTGTACCACAGTCTACTGCAGAAATACGAGGGTTGGTATGTGAGGATATAACTGGAGGTCAAGAAAATATTCCAATTCCTGCTACAAATTTGGTTGATGATCCCCCTGTTGCACCAACGGGTTTTACGTATTGCAACTCTGTTAAGGTTGCAAAAAATGTGAAGTTTCCCAAGGCTGCCACTGGATGCAAGTGCAAGGGTGTCTGCATTGATTCTACGACATGTGAATGTGCATTGCGAAATGGCTCTGAATTTCCCTACGTAGCTCAAAATGGTGGCAGGTTAGTTGAAGCTAAAGATGTTGTCTTTGAATGTGGTCCCAACTGTGGCTGTGATGAGACTTGTGTGAACCGGACTTCACAGAAAGGGATTCGATATCGTCTGGAGGTTTTCCGTACTGCAAAGAAAGGGTGGGCTGTTAGATCATGGGATTTTATACCAGCTGGTGCACCAGTTTGTGAGTACACAGGAATACTTGCTAGGACTGAAGACATGGACAGTGTATTAGAGAATAATTATATTTTTGAGATAGATTGCTTACAGACAATCAAGGGTCTTGGTGGAAGAGAGAGGCGATCGCAAAGTGGTACATTTCCATCAAATCTTTTGGATAAATATGATGACCATGGTTCAGATGGTGCACCAGAATACTGTATCGATGCTGGACCTACTGGAAATATTGCTAGGTTTATAAACCACTGTTGTGAGCCTAATTTGTTTGTTCAATGTGTCTTGAGCACCCACCATAACTTGAAATTTGCACGGGTAGTGCTGTTTGCTGCTGACAACATACCCCCACTGCAGGAGCTGACGTATGACTATGGTTATGAGCTTGATAGTGTATTGGGTCCCGATGGAAAGGTCAAACAAGTGACATGCTACTGTGGAGCTCCAGGTTGCAGGAAGCGATTATTCTAA 2418 0.4479 MGSDCIAYIVVEPIINNTGRNIASSRFLSPLTTLSLHSLFPSPQTLGASNPSYTSRFACLQVEGAVALIQNSIVLGGVYSQYSMVPKTEKSSDFEMPARNSDETVEKKNVAKDMSVQRRASARIQAAKQKAEEELHARRGAVVVEEEKEKEEKRVKVAKKWSKKRVRNGEYLGEGEVVVGVASPKKGNNGSGNEDGVGEGEGGVASSLAKKPNRRPFMQDQNGVGDSENAVANSAENKGAALRVKETIRVYNKHYLHFVQEEEKRCGKAKAESEAAKKSKSSKSKKAGPLEVKKTHQRPDLKALSMMMTNNEILYPEKRIGDLPGIEAGHQFFSRGEMVAVGFHSHWLNGIDYMGKSYGKVNSIYEYPIAVAIVLSGQYEDDVDNADDVVYTGQGGHNLTGDKRQINDQKLERGNLALKNCIEQDVPVRVIRGHKSSNGKSSNGKSSNGATKIYTYDGLYKVIKYWAEKGISGFTVYKFQLKRIEGQPLMTTNQVYFTRGRVPQSTAEIRGLVCEDITGGQENIPIPATNLVDDPPVAPTGFTYCNSVKVAKNVKFPKAATGCKCKGVCIDSTTCECALRNGSEFPYVAQNGGRLVEAKDVVFECGPNCGCDETCVNRTSQKGIRYRLEVFRTAKKGWAVRSWDFIPAGAPVCEYTGILARTEDMDSVLENNYIFEIDCLQTIKGLGGRERRSQSGTFPSNLLDKYDDHGSDGAPEYCIDAGPTGNIARFINHCCEPNLFVQCVLSTHHNLKFARVVLFAADNIPPLQELTYDYGYELDSVLGPDGKVKQVTCYCGAPGCRKRLF 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02235 805 ProSiteProfiles Pre-SET domain profile. 561 623 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu06g02235 805 ProSiteProfiles YDG domain profile. 321 483 IPR003105 -
Adu06g02235 805 MobiDBLite consensus disorder prediction 270 299 - -
Adu06g02235 805 ProSiteProfiles Post-SET domain profile. 789 805 IPR003616 -
Adu06g02235 805 SMART PostSET_3 789 805 IPR003616 -
Adu06g02235 805 Pfam SAD/SRA domain 320 487 IPR003105 -
Adu06g02235 805 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 116 804 - -
Adu06g02235 805 ProSiteProfiles SET domain profile. 626 775 IPR001214 GO:0005515
Adu06g02235 805 Coils Coil 259 279 - -
Adu06g02235 805 SMART preset_2 514 610 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu06g02235 805 Pfam Pre-SET motif 518 618 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu06g02235 805 SUPERFAMILY PUA domain-like 303 504 IPR015947 -
Adu06g02235 805 SUPERFAMILY SET domain 511 782 IPR046341 -
Adu06g02235 805 Gene3D - 304 500 IPR036987 -
Adu06g02235 805 SMART G9a_1 316 487 IPR003105 -
Adu06g02235 805 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 164 805 IPR025794 GO:0016571
Adu06g02235 805 SMART set_7 626 781 IPR001214 GO:0005515
Adu06g02235 805 MobiDBLite consensus disorder prediction 182 229 - -
Adu06g02235 805 Pfam SET domain 637 775 IPR001214 GO:0005515
Adu06g02235 805 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 116 804 - -
Adu06g02235 805 Gene3D SET domain 509 805 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02235 Adu-Chr6 93357116 93374397 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02235 307 805 EF-hand Containing Proteins AT5G13960 66.135 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Adu06g02235 SAD_SRA 1.6e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02235 K11420 - gmx:100795584 920.228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02235 06 93357116 93374397 Adu06g02235 06 93357116 93374397 ECH