Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02171 ATGGCGTCACGGCTTCGGCGACGGTGGCTGGGCGGTGGCGGAGCCTCAACGACAATGATCTCATCCTTTGCGGCGCAGTTTTTGTGTCACGGTGtctcctctctcaacgGAGAGAGTGAAACCAATCTGAGGAAAGCATTTGAAGAGGCTGAAAAGAATGCACCATCCATCATCTTCATTGATGAAATCGATTCTATTGCACCCAAGAGGGAGAAGACACATGGTGAAGTTGAAAGGAGGATTGTTTCACAGCTTTTGACTCTTATGGATGGATTGAAATCTCGTGCTCATGTTATCGTTATTGGAGCTACCAATCGCCCAAACAGCATTGACCCAGCATTGAGAAGGTTTGGTAGATTTAATAGGGAAATTGATATTGGTGTTCCTGATGAAGTTGGCCGACTTGAAATTCTTCGTATACACACTAAAAACATGAAGCTCTCTGATGATGTAAGTTTCATTGTCTCTTAA 471 0.4289 MASRLRRRWLGGGGASTTMISSFAAQFLCHGVSSLNGESETNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFNREIDIGVPDEVGRLEILRIHTKNMKLSDDVSFIVS 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02171 156 Pfam ATPase family associated with various cellular activities (AAA) 33 127 IPR003959 GO:0005524|GO:0016887
Adu06g02171 156 PANTHER AAA-FAMILY ATPASE 32 152 - -
Adu06g02171 156 ProSitePatterns AAA-protein family signature. 98 116 IPR003960 GO:0005524|GO:0016887
Adu06g02171 156 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 151 IPR027417 -
Adu06g02171 156 SMART AAA_5 11 130 IPR003593 -
Adu06g02171 156 Gene3D - 19 128 IPR027417 -
Adu06g02171 156 Gene3D - 129 153 - -
Adu06g02171 156 CDD AAA 40 127 - -
Adu06g02171 156 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG E 32 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02171 Adu-Chr6 90731985 90734753 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02171 37 153 Calmodulin-binding Proteins AT3G56690 49.580 7.53e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02171 K13525 - adu:107470247 234.958