Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02151 ATGGAAGAGCCTGTCGTAGTTAACAAAGGCGAGGAGCCGCTGGATTTGCCACCAGGTTTCAGATTCCACCCAACAGACGAAGAAATCATCACTTATTACCTCACCGAGAAGGTCATGAACAGCAGCTTCAGTGCAACTGCCATAGGTGAAGCCGATTTGAACAAATCCGAACCCTGGGATTTACCAAAGAAAGCAAAGATGGGAGAGAAGGAGTGGTACTTCTTTTGTCAGAAGGACAGGAAATACCCGACGGGGATGAGGACCAATAGAGCAACGGATTCCGGTTACTGGAAGGCAACCGGAAAAGACAAAGAGATTTTCAAAGGGAAAGGGAATCTCGTTGGGATGAAGAAAACGCTTGTTTTCTACCGAGGTAGAGCTCCCAAGGGTGAAAAGACCAATTGGGTCATGCATGAGTTCAGATTGGAAGGCAAATTTGCCAATTATAACCTCCCCAAGGCTGCAAAGGATGAATGGGTTGTGTCGAGGGTTTTTCACAAGAACACAGATGTAAAGAAGACTACTACCCCATCATCATCATCATCAATAATTCCTGGCCTTTTGAGGATCAACTCAATAGGCGATGATCTTCTAGATTGTTCCACACTCCCACCTCTCATGGACCCTCACCCTACTCCTCTCGATACAACAAAATCCGACGGCTATTATTTCCCCTCCTTCTCATCATCACATCAGATTCTCAATATCAAGCCCGAAGAACACAACACAAGCCACCAAATTCCCATCACCAACTACCAGATTCCAAATTTCAATACCACACTCTCTTCTTCATCATCTCATCAAATCAGACTCCAAAATCATCTCAACTTGTTCTCATCATCATCATCAAATAACAATTACCATAATAGCTCGTGGCCAAGCTATTATGATGAGGTCCACCACCATCATCAAGATGATATTCTACTAAGAGCAATCGCCTCAAAGAACTATAGCAACGGAGGAGGAGGAGGCGGCGGCGAGTGCAAGGTGGAGCAATTCTCCTCCGGCAACCAGTCAGTGGTGAGCGTTTCGCAAGACACGGGGCTGAGCAACGACAGAACCACCAATGACACGTCATCGGTGGTTTCGAAGCAGCAGCATAATAATAAAACATTGTACGAGGATCTTGAAGGTCCTTCTTCATCAGTTGCACCTCTTTCAGATTTGGAATGCTTGTGGGATACCTACTGA 1191 0.4559 MEEPVVVNKGEEPLDLPPGFRFHPTDEEIITYYLTEKVMNSSFSATAIGEADLNKSEPWDLPKKAKMGEKEWYFFCQKDRKYPTGMRTNRATDSGYWKATGKDKEIFKGKGNLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLEGKFANYNLPKAAKDEWVVSRVFHKNTDVKKTTTPSSSSSIIPGLLRINSIGDDLLDCSTLPPLMDPHPTPLDTTKSDGYYFPSFSSSHQILNIKPEEHNTSHQIPITNYQIPNFNTTLSSSSSHQIRLQNHLNLFSSSSSNNNYHNSSWPSYYDEVHHHHQDDILLRAIASKNYSNGGGGGGGECKVEQFSSGNQSVVSVSQDTGLSNDRTTNDTSSVVSKQQHNNKTLYEDLEGPSSSVAPLSDLECLWDTY 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02151 396 ProSiteProfiles NAC domain profile. 16 167 IPR003441 GO:0003677|GO:0006355
Adu06g02151 396 MobiDBLite consensus disorder prediction 339 376 - -
Adu06g02151 396 MobiDBLite consensus disorder prediction 339 381 - -
Adu06g02151 396 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
Adu06g02151 396 Gene3D NAC domain 25 172 IPR036093 GO:0003677|GO:0006355
Adu06g02151 396 SUPERFAMILY NAC domain 13 168 IPR036093 GO:0003677|GO:0006355
Adu06g02151 396 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 382 - -
Adu06g02151 396 PANTHER NAC DOMAIN-CONTAINING PROTEIN 100-LIKE 3 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02151 Adu-Chr6 89566804 89568791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02151 2 396 NAC Transcription Factor Family AT3G04060 49.502 3.49e-112 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu06g02151 NAM 1.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02151 - - aprc:113861501 499.59