Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02069 ATGGCGCCGAAGCAGAGAGCAGCAAGGAAGGTCGGCAGGAACCCTGAACTGGTGCGGGGGATCGGGAAGTACTCTCGGTCTCAGATGTACCACAAGAGGGGTTTGTGGGCCATAAAGGCTAAGAATGGTGGCAAATTATTGATCCAATTGATCTTATATGTTTCATTTTTTTTTTGTCGCGTTTTCAGGGCTAGCATTACTCCTGGGACAGTGCTGATTCTTCTTGCTGGAAGATTCAAGGGGAAGAGAGTTGTGTTCCTCAAGCAGCTTCCTTCTGGGCTGCTTCTTGTGTCTGGACCCTTCAAGATTAATGGAGTTCCGTTGAGACGTGTGAATCAGTCGTATGTTATTGCCACATCAACCAAAGTAGATGTGTCTGCTTGTAACGTGGAGAAATTCGATGACAAATACTTTTCAAAGGAAGTCCAGAAAAAGAAAAAGAAGGGAGAAGGCGAGTTCTTTGAGTCCGCGAAAGAGGAGAAGAAGACCCTCCCTCAAGACAAGAAGGATGACCAGAAGACTGTTGATTCTGCTTTGATAAAAGCCATAGAGAGTGTTCCAGACTTGAAGTTTTACCTTGGTGCTAGGTTTTCTTTGAAGCAAGGCCAGAAGCCTCATGAATTAGTCTTCTAG 633 0.4534 MAPKQRAARKVGRNPELVRGIGKYSRSQMYHKRGLWAIKAKNGGKLLIQLILYVSFFFCRVFRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIATSTKVDVSACNVEKFDDKYFSKEVQKKKKKGEGEFFESAKEEKKTLPQDKKDDQKTVDSALIKAIESVPDLKFYLGARFSLKQGQKPHELVF 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02069 210 ProSitePatterns Ribosomal protein L6e signature. 104 122 IPR000915 GO:0003735|GO:0005840|GO:0006412
Adu06g02069 210 PANTHER 60S RIBOSOMAL PROTEIN L6 1 44 - -
Adu06g02069 210 PANTHER 60S RIBOSOMAL PROTEIN L6 62 210 - -
Adu06g02069 210 CDD KOW_RPL6 60 210 IPR041997 -
Adu06g02069 210 Pfam Ribosomal protein L6, N-terminal domain 5 39 IPR005568 GO:0003735|GO:0005840|GO:0006412
Adu06g02069 210 Gene3D - 64 148 IPR014722 -
Adu06g02069 210 Pfam Ribosomal protein L6e 103 210 IPR000915 GO:0003735|GO:0005840|GO:0006412
Adu06g02069 210 PANTHER 60S RIBOSOMAL PROTEIN L6 62 210 IPR000915 GO:0003735|GO:0005840|GO:0006412
Adu06g02069 210 SUPERFAMILY Translation proteins SH3-like domain 64 154 IPR008991 -
Adu06g02069 210 PANTHER 60S RIBOSOMAL PROTEIN L6 1 44 IPR000915 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02069 Adu-Chr6 86988012 86989481 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02069 1 210 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 67.949 1.34e-90 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02069 K02934 - pvy:116113922 288.885