Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02031 ATGAGCGGCGAAACCGTGCCGGTGGAGGAAGCAGAAGCGATGAATTTGTCTGCCGCATATACAGACATAGATGTAGAAGTATTAGTGAGGATTGTTGACGGGATATGGTCGTTTGGCGTAGTTGAATTTTTAGCCCTCATCGCGAAGGACATCCTAATGACGGAGTTCATAAACTTGCAGGCAGCTTATGACTACTACAACGAATATAGTCGCATTAAAGGATTCTCGGTGAGGAGGTTGAAGGTGTGTCGCAGAACAAAGCAGAGGGCGGAAGGTAAAATCATTTGGCAGATATTCATATGCTCGAGGGAAGGAGAACGAGATGGGAAACCCATGCAGCGGGGAGAGAAGAAGATGGATCCTCGACCGATCACACGGTGCGGGTGTGAAGCTCGGATTAAGGTGCACGTTGATGATACTAATGAGCGATGGTTTGTTGAACAATTATGTGATAACCATAATCATCCCATGCTGGATGCGAGGTTTAGGGGTATGATGCGGTCACACAGAGCAGTAAGGGAAGGTGATTGGCACCAAATCAATTTGATGAGGAAAGATGGGTTGCAAGTGCCGACGATATTCTGTGCCTTTGCCAATCAGTCAGGGGGATTCGAGACTGTTGGGTTCAAGATAAAGGACATCTATAATGCAATAGAGAAGCAAAGGCGGGCAAGCGTGACAAATGTTGAGGCCGCATTGAAGATCTTGGAAACTTTAAGGACTACCGATTGTGAAAtgttctggaagtactctctcgatgGACTGAAGACAACGTCGAGGTGCGAGGCTTTGACTATGCAGATTGGAAAATTTATACACAACGCATATAATCTAAGGGAGTTTATGGAGCACTTCCAACACTACCTGGAATTCATGAGAAGAAGAGAATTGGTGGTAGACTACAGGTCTGCATACGGCGAACCTGTTGTAAAAACAAAATTTGAAGCCATTGAGCAGTTCGCAGGCTGCAGCGACGGTTTATATAAGAGAGCTATCCCTAGAAGTCTCATACTTGATCGGTGGACCAAAAGGCCAAAGCAGCCGAGTGTGACAAGTGATGGAGGAGCTGGTGAACTTGTCTTGACGGTTCTTCGAGGACTACTTGGATGTGAAAACAAGGTTGGCAAGGGAGCACCAATCCCTTACAAAGGATGCGGACGTAGAGTTGTCACTTCCAGGGATAAGTTCTGCCGTGTTCAGAGGTACCGGGTGTGTGGAAAAGCTGGACACAATTCTCGCAAGTGTCACGAATCATGTACAGGGGAGAACATCGGTAATTGCGAGGCAGCGGTGGCTTATGAGAGCATGCTAGCAGGAGAGGGAGGTGAGGACTACTTTGATTTTGAGTGA 1350 0.4615 MSGETVPVEEAEAMNLSAAYTDIDVEVLVRIVDGIWSFGVVEFLALIAKDILMTEFINLQAAYDYYNEYSRIKGFSVRRLKVCRRTKQRAEGKIIWQIFICSREGERDGKPMQRGEKKMDPRPITRCGCEARIKVHVDDTNERWFVEQLCDNHNHPMLDARFRGMMRSHRAVREGDWHQINLMRKDGLQVPTIFCAFANQSGGFETVGFKIKDIYNAIEKQRRASVTNVEAALKILETLRTTDCEMFWKYSLDGLKTTSRCEALTMQIGKFIHNAYNLREFMEHFQHYLEFMRRRELVVDYRSAYGEPVVKTKFEAIEQFAGCSDGLYKRAIPRSLILDRWTKRPKQPSVTSDGGAGELVLTVLRGLLGCENKVGKGAPIPYKGCGRRVVTSRDKFCRVQRYRVCGKAGHNSRKCHESCTGENIGNCEAAVAYESMLAGEGGEDYFDFE 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02031 449 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 47 186 - -
Adu06g02031 449 ProSiteProfiles WRKY domain profile. 109 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu06g02031 449 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 47 186 - -
Adu06g02031 449 Pfam FAR1 DNA-binding domain 64 158 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02031 Adu-Chr6 86026229 86028519 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu06g02031 FAR1 3e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02031 - - adu:107460993 396.356