Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02023 ATGTCTGAGCGACAAGGTGTTGGTGATCATGGCACCAATTCAGGAACACGGCGAAAAGGTGCGGCCACAAAGCGTGCCATGGCAGTGGCAGCAGCAGCAACAGTGCCTCCATGTGGGGCATGCAAGTTCTTGAGGAGGAAGTGCATCAGCGGCTGCATCTTTGCGCCCCATTTTGGCTCCGACCAAGGCGCAGCTCGCTTCGCAGCCGTGCACAAGGTGTTTGGTGCAAGCAACGTGTCGAAACTGTTGTTGCATATTCCGGTGAACCGCCGCCATGAGGCGGTGGTTACCATATCCTATGAGGCACAGGCAAGGCTGTCTGATCCGGTGTATGGTTGTGTGTCGACCATTCTTGCTTTGCAACAACAGACTCATTTTCAGGTGGCATCATTGCAAGGGGAGCTTTCTATGGTGCAAAATCAGCTGATAAATTCTAGGTTTGCATATGCAAATGTTCTTCATCAGTGCACACAACAGCATCATCATCATCATCATCATGATAATAATCAGCCAAACATGATCAATGTATCTTTATTACAACAACCAGCATACTCCAACAATAATTCATCTGCTTCAACCAATAATAACCTTGTGAACATGAACACCTTCAATAATAATAATAATAACCATTCAGGTTTCGAGCTTGCAATGGAGGCGGCACCATCATCACCACCACACAGCTTTGAGCCTCTTCGGTTGTCACAGGAAAATAATGACGAGGATGATGAGGAAGAGAGCATCATTATTCCACAACTATTCAACCATGAGATAGTGCTTCACCGTCAATGA 789 0.4677 MSERQGVGDHGTNSGTRRKGAATKRAMAVAAAATVPPCGACKFLRRKCISGCIFAPHFGSDQGAARFAAVHKVFGASNVSKLLLHIPVNRRHEAVVTISYEAQARLSDPVYGCVSTILALQQQTHFQVASLQGELSMVQNQLINSRFAYANVLHQCTQQHHHHHHHDNNQPNMINVSLLQQPAYSNNNSSASTNNNLVNMNTFNNNNNNHSGFELAMEAAPSSPPHSFEPLRLSQENNDEDDEEESIIIPQLFNHEIVLHRQ 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02023 262 MobiDBLite consensus disorder prediction 1 19 - -
Adu06g02023 262 MobiDBLite consensus disorder prediction 218 241 - -
Adu06g02023 262 Pfam Lateral organ boundaries (LOB) domain 37 136 IPR004883 -
Adu06g02023 262 MobiDBLite consensus disorder prediction 1 21 - -
Adu06g02023 262 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 5 244 - -
Adu06g02023 262 ProSiteProfiles LOB domain profile. 36 142 IPR004883 -
Adu06g02023 262 PANTHER LOB DOMAIN CONTAINING PROTEIN 5 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02023 Adu-Chr6 85632674 85633989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02023 37 246 AS2 family AT3G03760 62.441 2.72e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Adu06g02023 LOB 2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02023 - - ahf:112698228 422.165