Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Adu06g02004 | ATGGTGGTGGCTTATGTGACAAAAGTTTTGAAAGTTGCAGAGAAGAAGTTTAAGGCAACCCTTAACGTGTTCACCGAGGAGCCCGTTCAGAAGACAACAAGCTCGTTTAACACTGCAAAGTTACTCTATGTGACGACCCCTCATCTTGGAGCTAGCACTAAAGAGGCTCAGGAGGGTGTTGCTCTTGAGATTGCGGAGGCTGTGCTTGGTGCCTTGAAGGGCGAGCTGTCCTCAATCGCTGTGAATGCTCCCATGGTACCCCCTGACCCTGAGGTACTCTCCTATGTGGTGCTAGCGGAGAACTGTGGTCAAGTGATCAAGGGTTGGGATGAGGGAATCAAAACCATGAAGAAGGGTGAGAATGCCGTCTTCACGATTCCCCCAGAATTGGCCTATGGTGAATCTGGATCTCCTCCCACCATTCCTCCCAATGCAACTCTGCAGTTTGATATGGAGTTGCTGTCTTGGACGAGCGTCAAGGACATTTGCAAAGATGGAGGGATATTCAAGAAGATTGTCATTGAAGGAGAGAAATGGGAAAATCCTAAGGATCTTGATGAAGTGCTTGTTAAATATGTGGCTAAGCTTGAAGATGGCATCAGGTGA | 606 | 0.4802 | MVVAYVTKVLKVAEKKFKATLNVFTEEPVQKTTSSFNTAKLLYVTTPHLGASTKEAQEGVALEIAEAVLGALKGELSSIAVNAPMVPPDPEVLSYVVLAENCGQVIKGWDEGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDMELLSWTSVKDICKDGGIFKKIVIEGEKWENPKDLDEVLVKYVAKLEDGIR | 201 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Adu06g02004 | 201 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 103 | 157 | IPR001179 | GO:0003755 | |
| Adu06g02004 | 201 | Gene3D | - | 89 | 159 | IPR046357 | GO:0003755 | |
| Adu06g02004 | 201 | Gene3D | - | 50 | 75 | - | - | |
| Adu06g02004 | 201 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 103 | 154 | IPR001179 | GO:0003755 | |
| Adu06g02004 | 201 | Gene3D | - | 18 | 49 | - | - | |
| Adu06g02004 | 201 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 103 | 199 | - | - | |
| Adu06g02004 | 201 | Gene3D | - | 160 | 201 | IPR046357 | GO:0003755 | |
| Adu06g02004 | 201 | SUPERFAMILY | FKBP-like | 161 | 199 | - | - | |
| Adu06g02004 | 201 | SUPERFAMILY | FKBP-like | 101 | 161 | - | - | |
| Adu06g02004 | 201 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 103 | 199 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Adu06g02004 | Adu-Chr6 | 85150503 | 85157636 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Adu06g02004 | 103 | 199 | Calmodulin-binding Proteins | AT3G25230 | 87.629 | 1.36e-54 | 180 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Adu06g02004 | K09571 | - | zju:107421930 | 195.282 |