Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01964 ATGAGGATTGCGACACGATGGAAGGAAGCCAAAGGGATGAGGGGTGTAGAACAGGGGATAATGAGAAAGGTCTTTCAAAGTGAGAAAATAGCGTATGATATTTACAGTAAATTTGGCAGATGTCATGGATTTGGCATGTGCAAGGGGGATTATGGAAAGGATGAAGGCAACTTGATAAGGAGAATGTTTTTTGGTAACAGGGCTGGACTGAGAGATGAGAAACACTTGAATAGGATGGATAGAAAAAAGGGACACCGTCCAGAAACAAGTACTAATTGCATGGCTAAGCTGTCGATTTATCTGGATAGGAAAAACTTAACATGGAAGGTTCGCAAAGTAATATTGGATCACAATCATGAATTGACACCTCGAGGGATGGTGCACATGATTTCGAAATTCCGTCGTATGTCGGATGTGGCAAAGGCAAACATAGATGGCATGCGTGGGTATGGTGTTCTGACATCAAAGATTTTGGATTACATGGCTGGGGTTGCTGGAGGGTACTCTTTGTTGGACTTTATGAAAAAGGATGCATACAAATACATTGACCACATGAGGCGGGACAAGGTTGCTAATGGTGACTCGAATGCCGCTATTTTATATCTAGAGGGAAAGGCAGCGGCGGATCCAATGTCAATGGCTAGGTGTGAGGGAATAAATTCTTACGTAACGGGGTTTTTGAACTCAGGACATAGTATTTTGGAATTGATGCAAAATCTGGAGTTAGTAGTTCAAGAATACTACAACAACGAGCTGGTTGCGCAATTCAATTCAATATATAGCACCCCTGCTCTAACAATGTGCCTGGATCCTGTTGAGATGTGCGTTGTAGATGTTTACACGAGAGCTATTTTTGTACTAGTTAAGAAAGAGACTGATGGTGTTGGAGCGATTAATTTTGTGAGTAAAAGGAGAGTCTCCACAACAATGGAGAAGGAGGGCTTTCCATGCAGGCTCATGTTTTTTGTAATGAAGCACAAGCATTTAAAGGATATTCTAAGTCGTTTAATTCTAAAGCGGTGGAAGAGAGGTGCCAAGGCAATTAAAGAGTACGTCGACGACATGTTGAGTGAGAGAGGTTTTCTATTGCGACATGGGACACTCCATGTGGTGTCACAGTGGATGTTATACCTTGGTTCAAAGAATCGAACTGTATTTAAGAATGTAATGGAAGGAATTCGTGGAATTTGTACAAACATCCATGCACGTCTTGGTCAACCGAACGAGGGAAGAAAAGCAAATGTGGATGAGGATGTTTGGGATCCCGTTGTTGTTAGAACTAAAGGCACTCCACGGTCCAAAAGCAAAAAGGAAAAGAAGAGGAGATGTACGTTCTGCAAAAGGACCGGCCACACAAAGCGGACATGTCTTGATAGGGTACCAAACCGATCCAAATGGGGTCTGCAAGAGGATGAAAAATCTATCGAAAGATCAGGGGCTAATGAGGAGAGGATCGTCGAAACTGCACAAAGTGAGATTGTAGCATTTGTTGCAGATGCAGGCACTTGCGATTATCACCAACAGGCTCAGATGGCTTTTAGAAGTCCCAGTGATGCTTCAGCTAGTGGTTTAGTTTGTTTTTCTCAGGAGTCAGTAGTTGTTTAA 1605 0.4262 MRIATRWKEAKGMRGVEQGIMRKVFQSEKIAYDIYSKFGRCHGFGMCKGDYGKDEGNLIRRMFFGNRAGLRDEKHLNRMDRKKGHRPETSTNCMAKLSIYLDRKNLTWKVRKVILDHNHELTPRGMVHMISKFRRMSDVAKANIDGMRGYGVLTSKILDYMAGVAGGYSLLDFMKKDAYKYIDHMRRDKVANGDSNAAILYLEGKAAADPMSMARCEGINSYVTGFLNSGHSILELMQNLELVVQEYYNNELVAQFNSIYSTPALTMCLDPVEMCVVDVYTRAIFVLVKKETDGVGAINFVSKRRVSTTMEKEGFPCRLMFFVMKHKHLKDILSRLILKRWKRGAKAIKEYVDDMLSERGFLLRHGTLHVVSQWMLYLGSKNRTVFKNVMEGIRGICTNIHARLGQPNEGRKANVDEDVWDPVVVRTKGTPRSKSKKEKKRRCTFCKRTGHTKRTCLDRVPNRSKWGLQEDEKSIERSGANEERIVETAQSEIVAFVADAGTCDYHQQAQMAFRSPSDASASGLVCFSQESVVV 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01964 534 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 24 197 IPR031052 GO:0006355
Adu06g01964 534 Pfam FAR1 DNA-binding domain 34 122 IPR004330 -
Adu06g01964 534 SUPERFAMILY Retrovirus zinc finger-like domains 428 464 IPR036875 GO:0003676|GO:0008270
Adu06g01964 534 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 24 197 - -
Adu06g01964 534 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 200 307 - -
Adu06g01964 534 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 200 307 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01964 Adu-Chr6 83068704 83071938 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu06g01964 FAR1 1.5e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01964 - - aip:107607282 297.745