Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01954 ATGAAGATCTTTCTTTCTTTAAGGACATTGTCCTTTCTATGTTGCCTTCTCTTCGCTGCTAGTAACTTAGCATCTGAATCACACGCTTCAGTAACTTCGCAGGAGTTCCAGTACTTCTGTGATGAGCATAGCATTACCATAGATATCGAAGGCAACTACACAACCAATAGCACCTATCATACCAACCTCAACACTCTTATGTCAAATATTCTCAACAACAAAGAAATCGATTACAGTTTTTACAACGTCTCATACGGCGAGTACCCAAACAGAGTATACGCCATTAGACTATGTAGAGGAGACATTAAGCCGGAGCAGTGCCGAACTTGCCTAAACCAATCCAGAGCCAATCTCACGGCGGTTTGTCCGAATCGCAAGGTGCCGATCGGGTGGTACAACGACGAACTATGCATGCTACGATACTCGAATCGCAGCATATTCGATCGGATGGACAATGGACCGGCTTATTACAAGAAAAGCGACAAAAACACCACGGATTTGAATGAGTTCAATACAAAATTGAACGATTTGTTGAATGGCTTGAAAAGGAAAGCTTCTTCTGGTGACTCTCGGTTAAAGTATGCTGTGGGAAACTTTAGTCTTCCCAATTTTGATGATGTTTATGGTCTTGTTCAGTTCACGCCTGATTTGTCTGGAGAAGATTGTGATAACTGCATAGCTCAATCTATTGAAAGAATATCAAAAGATTATTGTAAGGATAGCATGGGTGGCAGGGTTGTTAGGCCAAGTTGTTTTATGAGATTTGAGACATCGTATCAATTCTATGGGCCAATGGCGTATACGCCACCTTCGCCGCCAGCATCTCCGCCGCCCACCACCACCTCTGTAACTAACCCGTCTTCAGGAAAGGATGATAACACTGAAGATATGGAAATTGTTGAGTCATTACAATTTAACTTGGAGAGTATACGAGACGCTACAAATGACTTTTCTGATGCTAATAAGCTTGGACAAGGTGAATTTGGGGCAGTTTACAAGGGTATTCTCACTAATGGACAAGAAATTGCTGTAAAAAGGTTGGCAAGGAGTTCTGATCAAGGAGACCTAGAATTTAAGAATGAAGTGTTGTTACTGGCTAAGCTTCAACATCGAAATTTAGTTAGCCTACTTGGTTTTTGTTTGGAAGGAAGAGAAAGGTTACTCGTCTATGAATTTGTACCCAATAAAAGTCTTGATTACTTTATATTTGATCCCAGCAAGAGAGCAAATTTGGATTGGAAAAGCTGCCACAGAATCATTGGAgattttggtactgcgaaactatttgctacaagTCAAACTCACTCTAATACAAATAGAATTGTTGGAACTTATGGATATATGGCACCTGAATATCAATTTTATGGACTATTTTCAATCAAGTCGGATGTATATAGTTTTGGTGTATTAGTTCTTGAGATTGTAAGTGGCAAGAAAAGCAGTGGCAATTGTCAGAGTAAGAATCCAGAGACTCTCATGAACTTTGCATGGAGAAATTGGAAGGATGGAACAATTTCAAACATTGTAGATACCACATTAAGAAATAGTTCGCAGAATGAAATAATGAGATTCATCCACATTGCTTTACTATGTGTTCAAGCAAATGAAGCTGATAGACCAACCATGGCTACAGTTTTACTCATGCTTAATAATCATTCGATCACACTCGCAGTACCTTCAGAACCTGCATTTTTTCTGAATACAGGATCAAACACATCGACAAAAGGACCAGCATAA 1737 0.3898 MKIFLSLRTLSFLCCLLFAASNLASESHASVTSQEFQYFCDEHSITIDIEGNYTTNSTYHTNLNTLMSNILNNKEIDYSFYNVSYGEYPNRVYAIRLCRGDIKPEQCRTCLNQSRANLTAVCPNRKVPIGWYNDELCMLRYSNRSIFDRMDNGPAYYKKSDKNTTDLNEFNTKLNDLLNGLKRKASSGDSRLKYAVGNFSLPNFDDVYGLVQFTPDLSGEDCDNCIAQSIERISKDYCKDSMGGRVVRPSCFMRFETSYQFYGPMAYTPPSPPASPPPTTTSVTNPSSGKDDNTEDMEIVESLQFNLESIRDATNDFSDANKLGQGEFGAVYKGILTNGQEIAVKRLARSSDQGDLEFKNEVLLLAKLQHRNLVSLLGFCLEGRERLLVYEFVPNKSLDYFIFDPSKRANLDWKSCHRIIGDFGTAKLFATSQTHSNTNRIVGTYGYMAPEYQFYGLFSIKSDVYSFGVLVLEIVSGKKSSGNCQSKNPETLMNFAWRNWKDGTISNIVDTTLRNSSQNEIMRFIHIALLCVQANEADRPTMATVLLMLNNHSITLAVPSEPAFFLNTGSNTSTKGPA 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01954 578 ProSiteProfiles Gnk2-homologous domain profile. 152 260 IPR002902 -
Adu06g01954 578 Gene3D - 154 261 IPR038408 -
Adu06g01954 578 Gene3D - 44 145 IPR038408 -
Adu06g01954 578 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Adu06g01954 578 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 288 421 - -
Adu06g01954 578 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 417 570 - -
Adu06g01954 578 SUPERFAMILY Protein kinase-like (PK-like) 303 569 IPR011009 -
Adu06g01954 578 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 6 282 - -
Adu06g01954 578 ProSiteProfiles Gnk2-homologous domain profile. 41 146 IPR002902 -
Adu06g01954 578 MobiDBLite consensus disorder prediction 269 294 - -
Adu06g01954 578 Pfam Protein tyrosine and serine/threonine kinase 420 546 IPR001245 GO:0004672|GO:0006468
Adu06g01954 578 Pfam Protein tyrosine and serine/threonine kinase 321 408 IPR001245 GO:0004672|GO:0006468
Adu06g01954 578 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 288 421 - -
Adu06g01954 578 Gene3D Transferase(Phosphotransferase) domain 1 398 558 - -
Adu06g01954 578 Gene3D Phosphorylase Kinase; domain 1 280 392 - -
Adu06g01954 578 ProSiteProfiles Protein kinase domain profile. 317 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu06g01954 578 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 282 - -
Adu06g01954 578 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 417 570 - -
Adu06g01954 578 Pfam Salt stress response/antifungal 160 257 IPR002902 -
Adu06g01954 578 Pfam Salt stress response/antifungal 51 143 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01954 Adu-Chr6 82642499 82646181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01954 45 565 Receptor kinase-like Gene Family AT4G38830 42.200 3.26e-150 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu06g01954 PK_Tyr_Ser-Thr 3.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01954 - - adu:107463438 914.064