Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01900 ATGGAACACAATCTAGGTCAAGGCAATGTTCCTCCACCTGGGTCTATTGATAAGTCTAGGGTTTTGAATGTTAAGCCACTGAGAACTCTTGTTCCTGTGTTTCCTTCGCCATCAAATCCCTCTTCCTCTTCAAATCCACAAGGTGGAGCACCCTTTGTTTGCGTTTCTCCTTCTGGTCCTTTCCCCTCTGGCGTTGCGCCGTTTTACCCGTTCTTCATCTCCCCGGAGTCGCAGAGGCTATCTGAACAGAATGCACAAACCGCACAAACCCCGGCTCCTCAACGTGTGGGCCCAATATCGGCCGCAGTTCCAATTAATTCATTTAGGACGCCAAATGGAGATGTGGGTTCATCACGAAAAAATAGCAGAACTCGTGGACAGTTAACAGATGAAGATGCCTATGCTGAGGTGCAGGACGTTGATGCTGAAGATGGAACGGGGGAAGGGAGGCGCACTAAACAGAAGAAACCAAGGGGACGGCGTCCTGGAGGTACTGCAGTGGTTGATCTGGATCAAGTGGCTAATGATATTCTCAATTCAATTAATCCTATTGTCTTTGATGTTCTAAAACAACCTGATGGTAGTAGGGATGCAGTTACATATACACTTATGATATATGAAGTTATGCGAAGAAAGCTTGGACAAGTTGAAGAGACATCAAGGGATATTGCTGGAGCAAAGCGGCCTGATCTGAAGGCTGGCAACATTATGATGACCAAGGGGATTAGGGCAAATAGCAAGAAACGTATTGGAGGTGTGCCTGGTGTTGAAATTGGGGATATCTTCTTTTTCAGATTTGAATTGTGCCTCGTTGGATTACACTCTCCATCTATGGCTGGAATTGATTACATTGGTTCCAAAACCAGTCAAGAGGAAGAACCACTAGCTGTCAGTATTGTCTCTTCTGGAGGATATGAAGATAATGCAGAGGATGGTGATGTGTTGATTTACAGTGGCCAAGGTGGGGCTAATCGGGAGAAAGGAGCAAGTGACCAAAAGCTTGAAAGGGGTAATCTTGCACTGGAAAAGAGCTTGCATAGAGGTAATGATGTGAGAGTAATTAAGGGTTTGAGAGATGAAGCACATCCAACTGGTAAGGTATATGTCTATGATGGCCTTTACAAGATCCAGGATTCGTGGGTAGAGAAAGCAAAATCTGGTTTCAATGTATTCAAATATAAATTAGCTAGGTTGCCCGGGCAGCCTGCAGCATATATGATATGGAAATCCATTCAACAGTGGACTGATAAAACTGTAACAAGAACTGGAGTTATATTGCCTGATCTTACTTCCGGGGCAGAAAATCTACCTGTTTGTCTTGTGAATGATGTTGATAATGAGAAAGGCCCTGCATATTTTACTTACTCCCCATCTGTCAAGAATTTGAAGCCAACTGCCCCTTTGGAATCTTCTGGTGGATGTTCTTGTACTGGTGGATGCCAAGCTATCAACCATAACTGTCCTTGTATTCAAAAGAACGGAGGTTATCTCCAATATTCTGCAAATGGGATGCTTGCTGATCTGAAGTCTGTGATATATGAGTGTGGTCCTTCCTGTCAGTGCCCTCCTAATTGCCGGAACAGGATTTCCCAAGGTGGCTTGAAATTTCGTTTGGAGGTGTTCAAAACTAAGGATAAAGGGTGGGGTCTAAGGTCTTGGGATCCTATTCGTGCAGGAACTTTCATATGCGAGTATGCTGGGGAAGTCATAGATAATGCTAAAGTTGATGAGTTTAGCAGTGAAAATGAAGATGATTACATTTTCGATTCTACTCGTATTTATCCGCAACTGGAAATTTTCCCAGCTGATACTGAAGCTCCAAAGATCCCTTCCCCTCTCTATATATCAGCAAAAAATGAAGGGAATGTGGCTCGGTTTATGAATCACAGCTGCTCCCCAAATGTATTGTGGCGTCCAGTTATACGGGAAAATAAGAATGAATCTGATCTCCACATTGCTTTCTATGCAATTAGACATATTCCTCCTATGATGGAGTTAACTTATGACTATGGAACAGTTCTTCCTCTCAAAGGAGGCCAGAAGAAAAAGAAATGCTTTTGTGGACTAAAGGATAAGCTCTTGCTGTGGCAGAAAGAAGGAAGAAACTTTCAGTAG 2115 0.434 MEHNLGQGNVPPPGSIDKSRVLNVKPLRTLVPVFPSPSNPSSSSNPQGGAPFVCVSPSGPFPSGVAPFYPFFISPESQRLSEQNAQTAQTPAPQRVGPISAAVPINSFRTPNGDVGSSRKNSRTRGQLTDEDAYAEVQDVDAEDGTGEGRRTKQKKPRGRRPGGTAVVDLDQVANDILNSINPIVFDVLKQPDGSRDAVTYTLMIYEVMRRKLGQVEETSRDIAGAKRPDLKAGNIMMTKGIRANSKKRIGGVPGVEIGDIFFFRFELCLVGLHSPSMAGIDYIGSKTSQEEEPLAVSIVSSGGYEDNAEDGDVLIYSGQGGANREKGASDQKLERGNLALEKSLHRGNDVRVIKGLRDEAHPTGKVYVYDGLYKIQDSWVEKAKSGFNVFKYKLARLPGQPAAYMIWKSIQQWTDKTVTRTGVILPDLTSGAENLPVCLVNDVDNEKGPAYFTYSPSVKNLKPTAPLESSGGCSCTGGCQAINHNCPCIQKNGGYLQYSANGMLADLKSVIYECGPSCQCPPNCRNRISQGGLKFRLEVFKTKDKGWGLRSWDPIRAGTFICEYAGEVIDNAKVDEFSSENEDDYIFDSTRIYPQLEIFPADTEAPKIPSPLYISAKNEGNVARFMNHSCSPNVLWRPVIRENKNESDLHIAFYAIRHIPPMMELTYDYGTVLPLKGGQKKKKCFCGLKDKLLLWQKEGRNFQ 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01900 704 Gene3D - 249 405 IPR036987 -
Adu06g01900 704 MobiDBLite consensus disorder prediction 34 51 - -
Adu06g01900 704 ProSiteProfiles SET domain profile. 536 671 IPR001214 GO:0005515
Adu06g01900 704 Pfam SET domain 547 671 IPR001214 GO:0005515
Adu06g01900 704 Pfam Pre-SET motif 430 528 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu06g01900 704 SMART set_7 536 677 IPR001214 GO:0005515
Adu06g01900 704 SMART G9a_1 246 401 IPR003105 -
Adu06g01900 704 MobiDBLite consensus disorder prediction 1 55 - -
Adu06g01900 704 ProSiteProfiles YDG domain profile. 251 397 IPR003105 -
Adu06g01900 704 SUPERFAMILY SET domain 412 677 IPR046341 -
Adu06g01900 704 SMART preset_2 426 520 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu06g01900 704 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 12 688 - -
Adu06g01900 704 MobiDBLite consensus disorder prediction 105 123 - -
Adu06g01900 704 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 100 702 IPR025794 GO:0016571
Adu06g01900 704 Gene3D SET domain 406 674 IPR046341 -
Adu06g01900 704 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 12 688 - -
Adu06g01900 704 SUPERFAMILY PUA domain-like 233 416 IPR015947 -
Adu06g01900 704 ProSiteProfiles Pre-SET domain profile. 472 533 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu06g01900 704 MobiDBLite consensus disorder prediction 79 94 - -
Adu06g01900 704 Pfam SAD/SRA domain 250 401 IPR003105 -
Adu06g01900 704 MobiDBLite consensus disorder prediction 79 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01900 Adu-Chr6 80301116 80304828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01900 6 688 Su(var)3-9 homologs AT1G73100 49.432 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Adu06g01900 SAD_SRA 3.8e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01900 K24405 - gmx:100805932 1107.43