Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01887 ATGGACCACCAGTACCGCCACGTCATCAGTGCCGGAGCCAGCGATCCCATGCTCCGCACCTCCACTCTACGCACCACCACCTTCTCCTTCCCCCTAGCTCGCTACACCACGCGCCTCATCGCAGCCGACCGCCGCCGCATGCTCCTCGCTGACTGCGCTGACCGCCGATCCGACGACGGCCTCGACGCTTCCGACGATGACGATGGCGGAGGATGCGCGTACTCCAGGCCCGTCCTCGTGTTGGACTTGGTGTGGAACCTGGCTTTCGTCGTCGTGGCTGCCGGCGTGCTCCTCTCCACGCTCCGGGAGCGGCCGGCGACGCCACTGAGGCTGTGGCTCTGTGGCTACGCGTTCGAGTGCGTGCTCCATATTTGCTTCGTGTTCTTCGAGTATCGCAGGAGAATCGGGGATCCTTCGCTGTCTCAGAGTCCGTACAGCATCCTGAAGAGGTTAGAGCCGGTGAACACTCTGGCATCATCTGTCTGGTGGGTGTTTGGATTTTATTGGATTGTTGTGGGCGGCCAAGCACTACTGGAAGATTCTCCGCAACTTTACTGGTTAACAGTGGTGTTTCTAGCCTTTGATGTATTTTTTATTATCTTTTGCATTGGGATGGCATGTATAATTTTCTTTGCTCTCTTTTGCCTTATCCCAATAATAGCATTAGCTTATGCTATAAGAATCAGGGAAGGTGCATCAGAAGAGGATATTAGGTCACTTCCTAAGTATAGGTTTGGCCAATCAAATTTGTTAGTGTTGGTTGATGACAACAAGCAGCAAATTGAAAAAGCAGGATCAGATTCATACAATGAAAATCATATCAGTGAACTTTTTCTCGAACCAGATGATTCTGAATGCTGCATCTGCCTATCCCCTTATGTTGATGGAGCAGAACTGTATCGCCTCCCCTGTACCCATCATTTCCACTGTGGATGCATCAGCCGCTGGCTCCGGACAAAAGCAACTTGCCCACTCTGCAAATTCAATATCCTTAGAGGCGATACGTTAGTCTAA 1014 0.5168 MDHQYRHVISAGASDPMLRTSTLRTTTFSFPLARYTTRLIAADRRRMLLADCADRRSDDGLDASDDDDGGGCAYSRPVLVLDLVWNLAFVVVAAGVLLSTLRERPATPLRLWLCGYAFECVLHICFVFFEYRRRIGDPSLSQSPYSILKRLEPVNTLASSVWWVFGFYWIVVGGQALLEDSPQLYWLTVVFLAFDVFFIIFCIGMACIIFFALFCLIPIIALAYAIRIREGASEEDIRSLPKYRFGQSNLLVLVDDNKQQIEKAGSDSYNENHISELFLEPDDSECCICLSPYVDGAELYRLPCTHHFHCGCISRWLRTKATCPLCKFNILRGDTLV 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01887 337 SMART ring_2 286 326 IPR001841 -
Adu06g01887 337 SUPERFAMILY RING/U-box 278 331 - -
Adu06g01887 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 256 333 IPR013083 -
Adu06g01887 337 ProSiteProfiles Zinc finger RING-type profile. 286 327 IPR001841 -
Adu06g01887 337 Pfam Ring finger domain 285 327 IPR001841 -
Adu06g01887 337 PANTHER TARGET OF ERK KINASE MPK-1 22 337 - -
Adu06g01887 337 PANTHER RING-FINGER UBIQUITIN LIGASE 22 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01887 Adu-Chr6 79761094 79764853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01887 13 334 C3H Transcription Factor Family AT1G68070 43.966 3.39e-92 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01887 - - ahf:112696795 641.728