Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01879 ATGCCCCTCTTTGACCCACCTAGGCATGATAGTGCCGAAACAATACGAAGGGCACTAAATCTCGAAGTAAATGTCAAAATGATTACAGGTGATCAACTAGCTATAGGAAAGGAAACAGGACAACACTTGGGAATGGATACCAATATGTACCCTTCATCTGCTTTATTTGAACAGGACAAGGATGAATTCATTGCTGCCTTGCCTATTGATGAACTAATCAAAAAAGCAGATGGCTGGTGTATTTCCTGGTATGTCTCGATACTATTCCGGGGACTTCACAATAAGAAGCCCGGGAAACCAGCTGATACTTCACAATTTCAGAGTCAGTTGGATGCGCTGAGCCTGCGCATTGTTGACATAGCAGCAAATGGTCTAAGAGTCCTTGTTGTTGATGATGACCCAACATGGCTTAGGATCCTTGAAAAGATGCTCAAGAAGTGTTCCTATGAAGGATGTGCTCTCTTCCATAGTGCTCCATTGGATGCAGGGACAATTTTTACAGTTCTTGCAACATTGAGGATCATGTTAGAACCAGTTAGGATGATCTCCGAGACTCTCTCTATTCTTATCCAAGTTGTGGTATCTTTCGATCGGCTCAATACCTTTTTGCTTGCTGAAGAGTTAGGCAGTAATGAAATTGTAAGGAGTGTTAAGCAAAGTTCAGTTGGTGACAACAATGCTGTAGAAATTAAATTTTGA 699 0.4163 MPLFDPPRHDSAETIRRALNLEVNVKMITGDQLAIGKETGQHLGMDTNMYPSSALFEQDKDEFIAALPIDELIKKADGWCISWYVSILFRGLHNKKPGKPADTSQFQSQLDALSLRIVDIAANGLRVLVVDDDPTWLRILEKMLKKCSYEGCALFHSAPLDAGTIFTVLATLRIMLEPVRMISETLSILIQVVVSFDRLNTFLLAEELGSNEIVRSVKQSSVGDNNAVEIKF 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01879 232 Gene3D ABC transporter type 1, transmembrane domain 147 207 IPR036640 GO:0005524|GO:0016021
Adu06g01879 232 PANTHER PLASMA MEMBRANE ATPASE 1 79 - -
Adu06g01879 232 SUPERFAMILY CheY-like 123 152 IPR011006 -
Adu06g01879 232 SUPERFAMILY HAD-like 3 64 IPR036412 -
Adu06g01879 232 PANTHER CALCIUM-TRANSPORTING ATPASE 1 79 - -
Adu06g01879 232 Gene3D - 5 79 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01879 Adu-Chr6 79109000 79111588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01879 1 80 Primary Pumps ATPases AT5G62670 83.750 1.08e-38 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01879 K01535 - pvy:116134722 139.813