Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01864 ATGTCAACCATGTCAAACAACGTCTCTTCTTCCCCAGCAAACCAGCCTGATAAGAAGGGTAAAGAGAAAGTTAATTTTGATGAAATGAACAAGGACAAGCAGATTCTAGTCAACGAACCAAACGTTCCAAACAACATGAACAACAAGCGCAAAGCAATCATGTTAGGAGATGATCATGATCATCCTAATACCGATGGTTCTGCTGCTGTTACCGAAGATGGAAGTGATTCCACTAAAGAACAGGAGCCCAACTCTGACAAAACTCTCATTATTGGTAGCCAGAATTCACAAAAGAAGAAAATTTCATACAATTGCACCTTTTGTGACAAGAGCTTTTCTTCCGCACAAGCTCTTGGGGGTCACCAAAATGGTCACAGAATGGAGAGAATGCAACAGTCCCATAACAAAAATAGCAGTGTAAATGATGGGATCCAACTCTTAAATAACATGACCATGGGTGCGGGTATGAACTCATCATCGTCAACAAGCTCCATGGAGCTACCGTCTTCGCCAACCATCCCTTCTTTTAGGCCCTTCTTTAATGGGGAACCTAATATGATGATCATGGGATACAATAATAATATTATTAATAATGATTATCATCCTTATCATCATGGTTTATTCCAGAACAATGGAGGGAGACCATCAAACTTTTTCAGTCCTGGCCCTGTGGTTGGTGCAAATAACAATTTTGCATACCCTCGTGTTGGTTCTGCTTTTGATGCAGTGGGAGTTGGAAACGTTGGTGCATTTCAGCATCCATATGAATTTCAAACAAGAGGCCTCAATGATGCTGCATCAGTGAACCCTGGACCTGGTGGTACATCTCAGCATCCTCGTCCTGCTATGGCTGCTGTTGAGATTAGCAGAACTAGAATTGGGAATAACAACAACAATAATAACGGTGGTGTCGAAAGGCAGATTGTGAATGAGGCCTGTGAGACCCCACAGGGTGAATTTGAGTTTGTTTTGCTTCCATGTGCAGCAAGAAACAACGAGAATAATATGGTGGAGATTGACTTTGGTCTGGTTCCAAAGAAAGACGAAAATGGAGAAGCAAAAGAAAAAGCCGCGTCAGAGACTGATTGA 1089 0.4197 MSTMSNNVSSSPANQPDKKGKEKVNFDEMNKDKQILVNEPNVPNNMNNKRKAIMLGDDHDHPNTDGSAAVTEDGSDSTKEQEPNSDKTLIIGSQNSQKKKISYNCTFCDKSFSSAQALGGHQNGHRMERMQQSHNKNSSVNDGIQLLNNMTMGAGMNSSSSTSSMELPSSPTIPSFRPFFNGEPNMMIMGYNNNIINNDYHPYHHGLFQNNGGRPSNFFSPGPVVGANNNFAYPRVGSAFDAVGVGNVGAFQHPYEFQTRGLNDAASVNPGPGGTSQHPRPAMAAVEISRTRIGNNNNNNNGGVERQIVNEACETPQGEFEFVLLPCAARNNENNMVEIDFGLVPKKDENGEAKEKAASETD 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01864 362 Pfam C2H2-type zinc finger 103 126 - -
Adu06g01864 362 ProSiteProfiles Zinc finger C2H2 type domain profile. 103 130 IPR013087 -
Adu06g01864 362 MobiDBLite consensus disorder prediction 1 15 - -
Adu06g01864 362 ProSitePatterns Zinc finger C2H2 type domain signature. 105 125 IPR013087 -
Adu06g01864 362 SUPERFAMILY beta-beta-alpha zinc fingers 101 130 IPR036236 -
Adu06g01864 362 PANTHER ZINC FINGER PROTEIN 2 85 260 - -
Adu06g01864 362 MobiDBLite consensus disorder prediction 16 34 - -
Adu06g01864 362 Gene3D Classic Zinc Finger 78 159 - -
Adu06g01864 362 PANTHER ZINC FINGER PROTEIN JAGGED 85 260 IPR045320 GO:0003700
Adu06g01864 362 MobiDBLite consensus disorder prediction 52 66 - -
Adu06g01864 362 MobiDBLite consensus disorder prediction 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01864 Adu-Chr6 77592071 77593372 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01864 92 141 C2H2 Transcription Factor Family AT5G01860 44.000 2.67e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu06g01864 zf-C2H2_6 1.3e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01864 - - adu:107494137 692.96