Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Adu06g01859 | ATGGCAGTGTCTCCTCCTCTTCCAAGCCAGTCTTTGGAAGCTGAATTTGAAGCTCAGAACTCTGAATCTCCACTCTTGCAAATTGGAAATGATGGCCTCACTAAACGTGTTATTAGGAAAGGTCTCACTTGGCAAACTCCATTCTTTGGAGACGAGGTTGAAGTTAATTTCAGAGGACAAGTTGAAAATGGAGCATCTCTTGAATCCAGTTATGATAAAGGGTCCACGTTTCGTTTCAAATTAGGCCAATGTGAAGTTATCAAGGGCTGGGATGAGGGAGTTGGGAGCATGAAGAAAGGGGAGAGAGCAATCTTCAAAATGCCACCTAACTTGGCGTATGGGGAAGTAGGGTCTCCACCACTGGTTCCTCCCAACGCGACTCTCATTTTCGAAATCGAATTGCTATCTTGGAATACCATTAAAGACTTGAATGGTGATGGAGGAATCATCAAAAAGATTCTAAAAGAGGGAGATGGATGGGCTACCCCTAAAGACGCTGATGAAGTTCTAGTGAAATATGAAGCAATGCTAGAGAGTGGCATGCTTGTCTCTAACTCTGACCAAGGTGTGGAATTTAATGTAAGTGAAGGCTATCTATGTCCTGCCATGAGTGTAGCAGTTAAGACCATGAGAAAGGGTGAGGTGGCAGAGCTAGCTTTGAAATTCTCTTATGGAATCCTTCAAAATTCAGATAGAATCAAGGAGCCTGATGGTTTTCTCCGACCGGATTTCAAGATAACAACAATCAAACTAGAGTTAGTATCCTGGAAAATTGTGACCGATGTCACAGGCAATAAGAAAATATTGAAGAAAATTAAGAAATCTGGTGAGGGGTTCGATCGTCCCAACGAAGGATCTCATGTGAAAGTTATATATTCATGTAAACAAAAAGATGGAACAATTATTCAGAAGAAAGGATCAGAGGAAGAACCTTTTGAGTTCACAATTCAAGAAGGACAGGTGCCTGAGGGTCTAGAAAGAGCAATAATGACAATGAAAAAAGCAGAACAAGCTCTTGTGACTATCAGTGCTGATTATTTTAGTGACAACAATTCACAGGGAGAAGGAGAAGATACACCTAACAATAACAATAATAGTAATAATAAAGCCCTTTACTATGAAGTTGAATTGGTTGATTTCGTTAAGGAGAAACCATTTTGGAAGATGGACAACCAAGAGAAATTAGAAGCTTGTGAGAAGAAGAAGCATGATGGGAATTTGATGTTTAAGGCTGAAAATTTCAAGCGTGCATCCATGGAATATGAAAAGGCTGTAAAATGCATAGAGTTTGATCATTCATTCAGTGAAGATGAGAAGAGTCATGCAAATACGTTACGGTTATCATGTAACTTGAATAATGCTGCTTGTAAACTCAAATTGGGGGACTACACTGAAGCTTCCAGATTATGCACAAAGGTACTAGAGAAAGATCCTTTAAATGTGAAGGCTCTATACAGAAGATGCCAAGCATACCTAAAAACATCAGATTTGGAGAAAGCTGAGGTTGATATTAAAAGAGCACTCATTATTGATCCAAATAACAGAGACATTAAAGTTGAGTACAAAGAGCTGAAACTCAAGCAGAAGGAATACAACAAATATGAATCCAACATCTTCGGCACAATGTTTTCAAGGATGAGCTAG | 1644 | 0.3936 | MAVSPPLPSQSLEAEFEAQNSESPLLQIGNDGLTKRVIRKGLTWQTPFFGDEVEVNFRGQVENGASLESSYDKGSTFRFKLGQCEVIKGWDEGVGSMKKGERAIFKMPPNLAYGEVGSPPLVPPNATLIFEIELLSWNTIKDLNGDGGIIKKILKEGDGWATPKDADEVLVKYEAMLESGMLVSNSDQGVEFNVSEGYLCPAMSVAVKTMRKGEVAELALKFSYGILQNSDRIKEPDGFLRPDFKITTIKLELVSWKIVTDVTGNKKILKKIKKSGEGFDRPNEGSHVKVIYSCKQKDGTIIQKKGSEEEPFEFTIQEGQVPEGLERAIMTMKKAEQALVTISADYFSDNNSQGEGEDTPNNNNNSNNKALYYEVELVDFVKEKPFWKMDNQEKLEACEKKKHDGNLMFKAENFKRASMEYEKAVKCIEFDHSFSEDEKSHANTLRLSCNLNNAACKLKLGDYTEASRLCTKVLEKDPLNVKALYRRCQAYLKTSDLEKAEVDIKRALIIDPNNRDIKVEYKELKLKQKEYNKYESNIFGTMFSRMS | 547 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Adu06g01859 | 547 | SUPERFAMILY | FKBP-like | 143 | 225 | - | - | |
| Adu06g01859 | 547 | Gene3D | - | 258 | 383 | IPR046357 | GO:0003755 | |
| Adu06g01859 | 547 | SUPERFAMILY | FKBP-like | 25 | 139 | - | - | |
| Adu06g01859 | 547 | Gene3D | Tetratricopeptide repeat domain | 384 | 540 | IPR011990 | GO:0005515 | |
| Adu06g01859 | 547 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 50 | 138 | IPR001179 | GO:0003755 | |
| Adu06g01859 | 547 | Gene3D | - | 142 | 257 | IPR046357 | GO:0003755 | |
| Adu06g01859 | 547 | ProSiteProfiles | TPR repeat profile. | 481 | 514 | IPR019734 | GO:0005515 | |
| Adu06g01859 | 547 | SUPERFAMILY | FKBP-like | 256 | 401 | - | - | |
| Adu06g01859 | 547 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 285 | 381 | IPR001179 | GO:0003755 | |
| Adu06g01859 | 547 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 162 | 225 | IPR001179 | GO:0003755 | |
| Adu06g01859 | 547 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 50 | 135 | IPR001179 | GO:0003755 | |
| Adu06g01859 | 547 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 281 | 378 | IPR001179 | GO:0003755 | |
| Adu06g01859 | 547 | Pfam | Tetratricopeptide repeat | 458 | 513 | - | - | |
| Adu06g01859 | 547 | SMART | tpr_5 | 481 | 514 | IPR019734 | GO:0005515 | |
| Adu06g01859 | 547 | SMART | tpr_5 | 447 | 480 | IPR019734 | GO:0005515 | |
| Adu06g01859 | 547 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 166 | 257 | IPR001179 | GO:0003755 | |
| Adu06g01859 | 547 | SUPERFAMILY | TPR-like | 392 | 543 | IPR011990 | GO:0005515 | |
| Adu06g01859 | 547 | Gene3D | - | 8 | 141 | IPR046357 | GO:0003755 | |
| Adu06g01859 | 547 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 9 | 260 | - | - | |
| Adu06g01859 | 547 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 372 | 547 | - | - | |
| Adu06g01859 | 547 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 259 | 378 | - | - | |
| Adu06g01859 | 547 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 372 | 547 | - | - | |
| Adu06g01859 | 547 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 259 | 378 | - | - | |
| Adu06g01859 | 547 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 9 | 260 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Adu06g01859 | Adu-Chr6 | 77353913 | 77371939 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Adu06g01859 | 26 | 546 | Calmodulin-binding Proteins | AT5G48570 | 53.143 | 0.0 | 545 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Adu06g01859 | - | - | adu:107494131 | 1073.54 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Adu06g01859 | 06 | 77353913 | 77371939 | Adu06g01859 | 06 | 77353913 | 77371939 | ECH |