Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01802 ATGTATGAATTATTCGGCAACTATTTCAGTGGCTCAATTCTAGAGTGGATAGGCCAAAAGAAAAACCTGCGGTTTCTTGATTTCTCTCAAAACTTGTTCTATGATACCATTCCCATCCGAGGTACTCTCTTTCTTTATCATCTTTCCCTTCATCGAAATTTCCAATCTCAATCAAATTTCTTCACAGAAAAGTTGAAAGACAAGCTAGCGGAGTTTTTCAACTGTCAATACAAGCACTTTGTTGAATTCACCGCTTTAATCAGCTGGAGGAGAGGTGCAAACATTGGGTGGCATAGTGATGATAACAGACCCTATCTCAAACAGCGGCACTTTGCAGATGGCCAGCCAATGTCAATTATGCCAATGGCTGAACTGAAGATTCAGAATCCTCCCTTACTAATAGAAGGTGAGAGGGTGTTCAAAGGGTGTGTATCTGCCAGCGAGTTGGAACTGATGGAACTCTTTGAGGACTACACATGCATGATTTGCCATTGTCCTAACCCAAGGAACACTCACATATTTGGTAACTGCATCATTCAGAGTACCACTTCTGTCTCACCTAAGCTAGATGCTTCTACTCGGTATCCTTCTCACTCCTTTCTCACTGTCTGCTTTCTCTGCAACAAGAATCCTGGGCATGGTAAAGACATCTACATGTACAGGGGTGAGAGATCATTTTGCAACAATGAATGCCGTTACCAGGGGATGTTGATGGAGGAAGAGATCAACAGATTGAAAGCTGAAGAGGCTGATGTTCGTGATTGTCGTGATTTCAAGTACAAAAGAGTAAATCTTGAGGGACAAGCGGTGAAGCTGAATAGAGCCAAGCTTGAGGCATGCTTAACATGTCCTTTGTGCAATAAATTGTTCAACAATGCCACCACCAATTTTGAATGCTTACACACTTTTTGCAGAGAATGCATAGATAAGAAGCTAATATATGAGCAATTAAAGCATTGTCTAGTATGCAATGCTGACTTGGGTTGTTCTCCACTTGATAAATTAAGGTTTGGAATCTCGGGCATATTCTTAAGGTTGTGTAGTTCATAG 1050 0.4124 MYELFGNYFSGSILEWIGQKKNLRFLDFSQNLFYDTIPIRGTLFLYHLSLHRNFQSQSNFFTEKLKDKLAEFFNCQYKHFVEFTALISWRRGANIGWHSDDNRPYLKQRHFADGQPMSIMPMAELKIQNPPLLIEGERVFKGCVSASELELMELFEDYTCMICHCPNPRNTHIFGNCIIQSTTSVSPKLDASTRYPSHSFLTVCFLCNKNPGHGKDIYMYRGERSFCNNECRYQGMLMEEEINRLKAEEADVRDCRDFKYKRVNLEGQAVKLNRAKLEACLTCPLCNKLFNNATTNFECLHTFCRECIDKKLIYEQLKHCLVCNADLGCSPLDKLRFGISGIFLRLCSS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01802 349 Pfam zinc-finger of the FCS-type, C2-C2 192 241 IPR007650 -
Adu06g01802 349 ProSitePatterns Zinc finger RING-type signature. 299 308 IPR017907 -
Adu06g01802 349 Gene3D Ribonuclease Inhibitor 2 83 IPR032675 -
Adu06g01802 349 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 267 340 IPR013083 -
Adu06g01802 349 PANTHER FCS-LIKE ZINC FINGER 8 135 243 - -
Adu06g01802 349 ProSiteProfiles Zinc finger FLZ-type profile. 199 243 IPR007650 -
Adu06g01802 349 SUPERFAMILY L domain-like 4 57 - -
Adu06g01802 349 ProSiteProfiles Zinc finger RING-type profile. 283 324 IPR001841 -
Adu06g01802 349 PANTHER FCS-LIKE ZINC FINGER 8 135 243 IPR044593 -
Adu06g01802 349 SUPERFAMILY RING/U-box 277 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01802 Adu-Chr6 73061198 73063799 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01802 265 336 C3H Transcription Factor Family AT2G30580 53.425 1.42e-19 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01802 - - adu:107494053 473.396