Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01799 ATGTCATCATCAGAAACACCCCAACGGTGGACTCAGCAACAACAAGAAGAAGCAAAAGATAATATCAATGAAGATGAAATGAATAATAATAAGGAGCTGATGTTCGAGAAGGTTCTTACTCCAAGCGACGTTGGGATGCTCAACCGCCTCGTCGTCCCAAAGTCCCACGCGGAGGCGCATTTTCCGACCGGCGCCGACGGATACTCGGCCGAAGGGAAGGGCCTGCTTCTGAATTTCGAGGACCAATCGGGAAAACAATGGAAGTTCCGTTATTGCTATTGGAGCAGCAGCCAGAGCTATGTTCTCACCAAAGGATGGGGCCGCTACGTTAGAGAAAACCACCTTTCTGCTGGCGACGTCGTTTTGTTCAAGAGGCACCGCCTCCATCCAAATAATTTCTTTATTAGTTGGAGGGGCCGCGATGCTGGGACCATGCCTCCGGCGGCTAGAGGGAGGGGGAAGAGGAGGAAGAGGAGGGATGAGGGTACCAGTGGTGGTGATGGCAACAGTAAGAGTGTGGTGGTGAGTGATGCTGCTGTTTCTGTTTCTGTGGGGTGCTATCCTGCGCCTTCTTATCCTACGTCCCACCACCAACATCCATTCTCCTCATTCTATCATTCTGATGAATATTTTCTTCATGCAGGTTTCTTCCTCTACTCTTCATCATCATTTCTTAACTACCCATTCATTAGATATTCTGCTTTTAAAAACGGTGGAGAGTGCCAAGGTGCGAACGAAACGACAATGGTGGGAAACCCTTCAAGTTCAGGTTCGAGGATGATGAGGCTGTTCGGGGTGAACATGGAATTGAATAATAATAATAATAATGAAACCTTCGCACCCTAA 846 0.4823 MSSSETPQRWTQQQQEEAKDNINEDEMNNNKELMFEKVLTPSDVGMLNRLVVPKSHAEAHFPTGADGYSAEGKGLLLNFEDQSGKQWKFRYCYWSSSQSYVLTKGWGRYVRENHLSAGDVVLFKRHRLHPNNFFISWRGRDAGTMPPAARGRGKRRKRRDEGTSGGDGNSKSVVVSDAAVSVSVGCYPAPSYPTSHHQHPFSSFYHSDEYFLHAGFFLYSSSSFLNYPFIRYSAFKNGGECQGANETTMVGNPSSSGSRMMRLFGVNMELNNNNNNETFAP 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01799 281 MobiDBLite consensus disorder prediction 1 24 - -
Adu06g01799 281 MobiDBLite consensus disorder prediction 144 172 - -
Adu06g01799 281 Gene3D - 23 146 IPR015300 -
Adu06g01799 281 SMART B3_2 35 141 IPR003340 GO:0003677
Adu06g01799 281 ProSiteProfiles B3 DNA-binding domain profile. 35 141 IPR003340 GO:0003677
Adu06g01799 281 SUPERFAMILY DNA-binding pseudobarrel domain 31 137 IPR015300 -
Adu06g01799 281 MobiDBLite consensus disorder prediction 1 17 - -
Adu06g01799 281 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0156000 11 274 - -
Adu06g01799 281 Pfam B3 DNA binding domain 35 139 IPR003340 GO:0003677
Adu06g01799 281 CDD B3_DNA 34 127 IPR003340 GO:0003677
Adu06g01799 281 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 11 274 IPR044800 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01799 Adu-Chr6 72616321 72619007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01799 25 140 RAV Transcription Factor Family AT2G36080 64.655 1.20e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu06g01799 B3 9.2e-27 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01799 - - aip:107647035 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01799 06 72616321 72619007 Adu06g01799 06 72616321 72619007 ECH
Adu06g01799 06 72616321 72619007 Adu02g02684 02 92742931 92745674 PCT