Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01794 ATGGTGACCGCGCCTTCACCCGAAGGCCACTTCTCCTTCATGGAACTTTTCAAGTCATTGAGACGCCGACATTACCCTTCAATGGTGACTGCGCCTATACCCAGATCCAACTTTTCCTTCGTGGAACTGTTCAGTGGTACAAGGTGTCACGCAACCATCTTTTCCTCAACCATATCCGGTAAGGTATATGTGTCTCCATTGAAGTCAAGTGGACCAACGACCATTTCCGTGGAAGAGAAATGCGACTTACCCGATCACACTGGAATTTCAATAGATGAAATTTCGTATGTAGGATTGAGATTTATTTCCTTGCAGCGGGCACAAGAGTTTTATTATAATTACAAAAAGAAAGTTGGCTTCGTGACTAGGATTAGGAATACCAACTTTGACAATACCAGGGAGGATTCAAAGATACCCATTAACCAATCATTACACTGTAGTCGTGAAGGTTATCGGGAGTCTCGAGTGAAAGTAGCAACTCGGGTAAAGAGAATAACAATAGTCGGATGCGAAGTAAGGATGTACGTGATGCTTGATAGGCAGAATGATAATTGGATGGTCTCCAAACTAGAACTGAAGCACACCCACCCGTGTTCTGCCAAGCAAGCTGTGTATTACACTGAGTACAGGGAACTGACCATGCATGCCAAGTGTGTGATTCAGAACAACGATGAGGCTGTCATACGGCCCAACAAGACTTATCTCGCACTGGCAAATGAGGTTGGTGGCTCGTCGAATTTGGGTTACTCAGAAAAGGATGTGAGGAATTACATTATGAGCAATCTGCGCTGTGCTGACGGAAACACAGATGTGAAGGAAATGATTAGCTATTTCATGCGAATGAAAGATATCAACCCGAATTTGTTTTATGCAGTGGATGTAGACGAAGCTAACAAGTTTAAAAGTGCACTCTGGGTAGATACAGGATGCAGGGCTTCCTATGAATATTATGGTGACGTGTTCGCAACGAAGGGTCGACCGAGATTGAAGAGGCTTAGATCTAAACTGGACACCTCCATTAAGAGATCTATGCGAAGAAAGAAGAATAATCCACCTCCGGAAAATAATGGAGCAATCAACCTAAACATAGTGGCGGTTTCTGCTTTACCCGATCACACTGGAATTTCAATAGATGAAATTTCGTATGTAGGATTGAGATTTATTTCCTTGCAGCGGGCACAAGAGTTTTATTATAATTACAAAAATAAAGTTGGCTTCGTGACTAGGATTAGGAATACCAACTTTGACAATACCAGGGAGGATTCAAAGATACCCATTAACCAATCATTACACTGTAGTCGTGAAGGTTATCGGGAGTCTCGAGTGAAGGTAGCAACTCGGGTAAAGAGAATAACAATAGTCGGATGCGAAGTAAGGATGTACGTGATGCTTGATAGGCAGAATGATAATTGGATGGTCTCCAAACTAGAACTGAAGCACACCCACCCGTGTTCTGCCAAGCAAGCTGTGTATTACACTGAGTACAGGGAACTGACCATGCATGCCAAGTGTGTGATTCAGAACAACGATGAGGCTGTCATACGGCCCAACAAGACTTATCTCGCACTGGCAAATGAGGTTGGTGGCTCGTCGAATTTGGGTTACTCAGAAAAGGATGTGAGGAATTACATTATGAGCAATCTGCGCTGTGCTGACGGAAACACAGATGTGAAGGAAATGATTAGCTATTTCATGCGAATGAAAGATATCAACCCGAATTTGTTTTATGCAGTGGATGTAGACGAAGCTAACAAGTTTAAAAGTGCACTCTGGGTAGATACAGGATGCAGGGCTTCCTATGAATATTATGGTGACATGTTCGCAACGAAGGGTCGACCGAGATTGAAGAGGCTTAGATCTAAACTGGACACCTCCATTAAGAGATCTATGCGAAGAAAGAAGAATAATCCACCTCCGGAAAATAATGGAGCAATCAACCTAAACATAGTGGCGGTTTCTGCTGTGAGTACGAATGAATCACAGGGACATGGCGGGTTCTTATCTTTGTTACACTCATTTCGACATACTTAG 2031 0.4313 MVTAPSPEGHFSFMELFKSLRRRHYPSMVTAPIPRSNFSFVELFSGTRCHATIFSSTISGKVYVSPLKSSGPTTISVEEKCDLPDHTGISIDEISYVGLRFISLQRAQEFYYNYKKKVGFVTRIRNTNFDNTREDSKIPINQSLHCSREGYRESRVKVATRVKRITIVGCEVRMYVMLDRQNDNWMVSKLELKHTHPCSAKQAVYYTEYRELTMHAKCVIQNNDEAVIRPNKTYLALANEVGGSSNLGYSEKDVRNYIMSNLRCADGNTDVKEMISYFMRMKDINPNLFYAVDVDEANKFKSALWVDTGCRASYEYYGDVFATKGRPRLKRLRSKLDTSIKRSMRRKKNNPPPENNGAINLNIVAVSALPDHTGISIDEISYVGLRFISLQRAQEFYYNYKNKVGFVTRIRNTNFDNTREDSKIPINQSLHCSREGYRESRVKVATRVKRITIVGCEVRMYVMLDRQNDNWMVSKLELKHTHPCSAKQAVYYTEYRELTMHAKCVIQNNDEAVIRPNKTYLALANEVGGSSNLGYSEKDVRNYIMSNLRCADGNTDVKEMISYFMRMKDINPNLFYAVDVDEANKFKSALWVDTGCRASYEYYGDMFATKGRPRLKRLRSKLDTSIKRSMRRKKNNPPPENNGAINLNIVAVSAVSTNESQGHGGFLSLLHSFRHT 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01794 676 Pfam FAR1 DNA-binding domain 109 198 IPR004330 -
Adu06g01794 676 Pfam FAR1 DNA-binding domain 395 484 IPR004330 -
Adu06g01794 676 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 381 608 - -
Adu06g01794 676 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 96 323 - -
Adu06g01794 676 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 96 323 IPR031052 GO:0006355
Adu06g01794 676 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 381 608 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01794 Adu-Chr6 72153640 72159101 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu06g01794 FAR1 8.3e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01794 - - ahf:112805632 484.567