Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01782 ATGAACCATTCCTGTAGTCCTAATGCCAAATCCTTCAAGAAAGACGAGGATAGGGATGGCCAAGCAACCATAATCGCAGTAAGGCCGATTCGAAAAGGAGAAGAGGTTGGCGGTCTCATTCAAGCAAAGTCTGCCAAAGGCTTTTCAGATGACTATACTGCTTCCCATTTTGAGCTTGTTGCTCTTGCATCTGAGTCTTCCGCCAATATAAGGACTATAGCGTCATTTTGCCATGAAGAACATATACTTGCAATTTCTGCTATTCCCTTAACAATGTCAGCAGGACTTCTTTTTGGGTCTGGTATTAGCACCATCATAGTCTCCATTAGTGGAACGATAATGTCATCATGGGCTGGCTACAAAATATATCCGAAGAAGAATAAAAGGAGGAACAAAAAGGCAAAGTTTTCTTGTGAAGAAAGCAGTGATTATGAAGAAGAAGCAGCAGAAAGAGCAAGTGAAGTAAATTTTGCAGATGAGATAAGTGGAATTAACACAGGACCTCCTTCCCCAACTTCATCTATTAATTATTAG 534 0.4064 MNHSCSPNAKSFKKDEDRDGQATIIAVRPIRKGEEVGGLIQAKSAKGFSDDYTASHFELVALASESSANIRTIASFCHEEHILAISAIPLTMSAGLLFGSGISTIIVSISGTIMSSWAGYKIYPKKNKRRNKKAKFSCEESSDYEEEAAERASEVNFADEISGINTGPPSPTSSINY 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01782 177 MobiDBLite consensus disorder prediction 134 177 - -
Adu06g01782 177 CDD SET 1 36 - -
Adu06g01782 177 SUPERFAMILY SET domain 1 36 IPR046341 -
Adu06g01782 177 Pfam SET domain 1 36 IPR001214 GO:0005515
Adu06g01782 177 MobiDBLite consensus disorder prediction 159 177 - -
Adu06g01782 177 MobiDBLite consensus disorder prediction 134 154 - -
Adu06g01782 177 Gene3D SET domain 1 37 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01782 Adu-Chr6 71254692 71257398 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Adu06g01782 SET 8.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01782 - K05658 aip:107604830 83.9593