Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01780 ATGGAAAACATGCCACCAGGTTATCGTTTCTACCCTACGGAAGAGGAGCTGATTTCATTCTATCTACGGAACAAGCTTGAAGGAGTGAGGGAGGACATGAATCGGGTTATTCCAGTTCTTGATATATATGAATATAGTCCAAGCGAACTCCCACAAATATCGGGAGAGGCGAGTGTTAGAGACAGCGAGCAGTGGTTCTTTTTCATTCCGCGGCAAGAAAGCGAAGCGCGTGGAGGGAGGCCGAAGAGGCTCACAACAACTGGAACCATGGTTTTCTACTGCGGTAGAGCTCCTAACGGAACTAAAACCGATTGGAAGATGAATGAGTATAAAGCCATTGACACTCATCACCCTTCTTCTTCCTCCAACAACAGGGCGGTTCCTATGAAAGCAAAATGTTTGAGGGCATTTGATAGAAGACCACCTCCAAGGAGGGACACGTATCCTCCTAGCCAGAACAACGGTTCATCATCTTTTGATCATCATCATCAACATAATCAAACGGTGGAGAAATCTTCAGGTGCAGGTAGCTCACCGGAGAGTTCGTGCTCCGAAGACCACGGACAGTGTTCTCATCGGACGGAGGATGTGGAAAACGCTAACGAGCCATTTCTCGATTGGGAGCAAATCGATTGGTTCTTAGGATCTTCACTGCCGGAACCATGA 666 0.4745 MENMPPGYRFYPTEEELISFYLRNKLEGVREDMNRVIPVLDIYEYSPSELPQISGEASVRDSEQWFFFIPRQESEARGGRPKRLTTTGTMVFYCGRAPNGTKTDWKMNEYKAIDTHHPSSSSNNRAVPMKAKCLRAFDRRPPPRRDTYPPSQNNGSSSFDHHHQHNQTVEKSSGAGSSPESSCSEDHGQCSHRTEDVENANEPFLDWEQIDWFLGSSLPEP 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01780 221 MobiDBLite consensus disorder prediction 135 203 - -
Adu06g01780 221 ProSiteProfiles NAC domain profile. 4 175 IPR003441 GO:0003677|GO:0006355
Adu06g01780 221 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 88 - -
Adu06g01780 221 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 89 212 - -
Adu06g01780 221 MobiDBLite consensus disorder prediction 186 200 - -
Adu06g01780 221 Pfam No apical meristem (NAM) protein 5 88 IPR003441 GO:0003677|GO:0006355
Adu06g01780 221 Gene3D NAC domain 89 134 IPR036093 GO:0003677|GO:0006355
Adu06g01780 221 Gene3D NAC domain 13 88 IPR036093 GO:0003677|GO:0006355
Adu06g01780 221 MobiDBLite consensus disorder prediction 169 185 - -
Adu06g01780 221 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 88 - -
Adu06g01780 221 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 89 212 - -
Adu06g01780 221 SUPERFAMILY NAC domain 2 119 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01780 Adu-Chr6 71224070 71225291 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01780 7 212 NAC Transcription Factor Family AT5G22380 44.351 2.91e-53 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu06g01780 NAM 1.6e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01780 - - adu:107494022 345.895