Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01768 ATGAACATGCCAAGATATGGTGCAACACCAGAAAAAGTGATACAAGTAATTGAGTCAAAATGGTCTTTTACTCTTCAAAAGCTTGAAGCTATCAATAACCCTTTGGATGAGGGTTTGAACAAGAACAATGGCAATGATGATATAGATATAAGTGTTGATTTCATAGCTAAACATGTAAGGGCCACTTGTGAATCGATGATAAAAGAAGAGTTTGGGTTTGTGGCGGCTACGAATAATCTTTTGTGGCGGCACCTCAAACACCAAACCTCTGCGGCTCTGCTCCTTACAATGAGTAAGCTACAGAGTGATGCACTGAGAGAGGCCATATCTCAGCTCGTTGCGAATGCGAACGAGAAGAAGCGCAAATTCACTGAGACAGTTGAACTTCAGATCGGTTTGAAGAACTATGACCCTCAGAAAGACAAGCGTTTCAGCGGTTCCGTTAAGCTTCCTCATATTCCTCGCCCCAAGATGAAGATCTGCATGCTTGGTGACGCTCAGCACGTCGAAGAGGCTGAAAAAATTGGGCTGGATTGGATGGATGTCGAGGCACTGAAAAAGCTTAATAAGAACAAGAAACTTGTGAAGAAGCTTGCTAAGAAGTATCATGCTTTTCTAGCTTCTGAAGCTGTCATCAAGCAAATTCCTCGCCTCTTAGGCCCTGGTTTGAACAAGGCAGGTAAGTTTCCAACATTAGTGACACATCAGGAATCCTTAGAGTCAAAAGTTAATGAAACAAAAGCAATGGTGAAGTTTCAACTTAAGAAAGTTCTTTGCATGGGTGTAGCTGTTGGAAATTGCTCAATGGATGAGAAACAGATATTCCAGAATGTACAACTCAGCGTCAATTTCCTTGTTTCATTATTGAAGAAAAACTGGCAAAATGTGAGATGCTTGTACCTCAAGAGTACAATGGGGAGTGCAATCCGCGTATTTTAG 939 0.4164 MNMPRYGATPEKVIQVIESKWSFTLQKLEAINNPLDEGLNKNNGNDDIDISVDFIAKHVRATCESMIKEEFGFVAATNNLLWRHLKHQTSAALLLTMSKLQSDALREAISQLVANANEKKRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKIGLDWMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNCSMDEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGSAIRVF 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01768 312 Pfam SAM dependent carboxyl methyltransferase 1 98 IPR005299 GO:0008168
Adu06g01768 312 PANTHER 60S RIBOSOMAL PROTEIN L10A-3 98 310 - -
Adu06g01768 312 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 98 310 - -
Adu06g01768 312 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 88 IPR029063 -
Adu06g01768 312 Coils Coil 102 122 - -
Adu06g01768 312 Gene3D - 115 306 - -
Adu06g01768 312 Gene3D - 161 250 IPR016095 -
Adu06g01768 312 Pfam Ribosomal protein L1p/L10e family 119 306 IPR028364 -
Adu06g01768 312 ProSitePatterns Ribosomal protein L1 signature. 212 231 IPR023673 -
Adu06g01768 312 SUPERFAMILY Ribosomal protein L1 99 312 IPR023674 -
Adu06g01768 312 Gene3D Vaccinia Virus protein VP39 3 34 IPR029063 -
Adu06g01768 312 CDD Ribosomal_L1 105 311 IPR028364 -
Adu06g01768 312 Gene3D - 2 80 IPR042086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01768 Adu-Chr6 70409878 70415118 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01768 97 312 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 87.037 1.88e-125 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01768 K02865 - gmx:100527763 390.193