Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01755 ATGACACCGGCTAGGGCTCCGCCGCGCAGACCATTGTCGTTGCGTGCTCtgaccgtcgcctcagcatcgccatctcgtgcactcaccgtcgccgctcagcatcatcatcgcAAGCCAGAAAATTGGGAATTGCTTGGGTGCTTCAAATTGGTTTTTGAGGGAGTGATGATAGTGATATTGCTGGAAGCCACGGGAACAAGAGATGAGGGAATAGTTGTTAAAGACCTCAGTTCTAAATGGGAGTCTAGTGATCAAAGTGGAAAGTGGCTAAAATTGAAGCCTGAGTACATTCAAGCTAGCGCTGATCTGGATGTGCTTATCATAGGAGGTTATTATGGCTCTGGACGATGTGGAGGGGAGGTTGCTCAGTTCTTGGTGGGCCTTGCTGAGCGTCCATCCCCAAATACACATCCCAAGCGGTTTATCTCCTTCTGTAGAGTTGGTACTGGGCTTTCTGATGATGAGCTTGATTCGTTAATTGAATCCGCACTTCCAACCTTGGCAAGACCGATTAGGTCTTTAGATCAAAATGAAGATGCTATTGTGGGATCTCTCAAGCAGAGCCTGGCTCAGCATGATGAATTCTTGGCTCTCTTCAATCTTGAAGACTATTCTATATTGTGTATTATGAATACTCAATTAACTTCATTCTAG 654 0.4067 MTPARAPPRRPLSLRALTVASASPSRALTVAAQHHHRKPENWELLGCFKLVFEGVMIVILLEATGTRDEGIVVKDLSSKWESSDQSGKWLKLKPEYIQASADLDVLIIGGYYGSGRCGGEVAQFLVGLAERPSPNTHPKRFISFCRVGTGLSDDELDSLIESALPTLARPIRSLDQNEDAIVGSLKQSLAQHDEFLALFNLEDYSILCIMNTQLTSF 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01755 217 Gene3D DNA ligase/mRNA capping enzyme 25 95 - -
Adu06g01755 217 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 61 98 - -
Adu06g01755 217 Gene3D - 96 195 IPR012340 -
Adu06g01755 217 SUPERFAMILY Nucleic acid-binding proteins 102 165 IPR012340 -
Adu06g01755 217 ProSiteProfiles ATP-dependent DNA ligase family profile. 59 130 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Adu06g01755 217 PANTHER DNA LIGASE 4 60 163 IPR029710 GO:0003677|GO:0003910|GO:0005524|GO:0006281|GO:0051103
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01755 Adu-Chr6 69118476 69122108 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01755 69 157 Core DNA Replication Machinery Family AT1G08130 33.696 4.00e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01755 K10777 - gmx:100816002 168.318