Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01692 ATGATCTCGACAAGGAGTGTTTGGAAGTGCAGAAGGGGAAGGCCTTCTATGACTTCCAGTTCAACACAAGGTAAAATTGTCGTGGTAGTGGGAATTGTAACCAACGATATCAGAGCGTTTGAAGTTCCTGCATTGAAGGTTACTGCACTCAGGTTTACAAAGACTGCACGTGCTAGAATAGAGAAGGCTGGTGGTGAATGCTTGACATTTGATCAGCTTGCACTTAGGGCACCTCTCGGATAG 243 0.4568 MISTRSVWKCRRGRPSMTSSSTQGKIVVVVGIVTNDIRAFEVPALKVTALRFTKTARARIEKAGGECLTFDQLALRAPLG 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01692 80 PANTHER 60S RIBOSOMAL PROTEIN L18 23 80 IPR000039 GO:0003735|GO:0005840|GO:0006412
Adu06g01692 80 Pfam Ribosomal protein 60S L18 and 50S L18e 16 80 IPR021131 -
Adu06g01692 80 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 23 80 - -
Adu06g01692 80 Gene3D - 3 80 - -
Adu06g01692 80 SUPERFAMILY Ribosomal proteins L15p and L18e 22 78 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01692 Adu-Chr6 60467065 60468298 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01692 20 80 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 72.131 2.81e-28 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01692 K02883 - vvi:104881363 103.219