Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu06g01686 | ATGCGTTCCAACAACACTTCTTCTTCTTCTTCTTCAGGCAGTAGTGGCACTGGTCGGCACCCTTTGTACCGAGGAGTGAGGCGCAGGAGCAGTGGCAAATGGGTCTCCGAAATCAGGGAGCCAAAGAAACCTACCAGGATTTGGCTTGGCACTTTCTCCAACCCCGAAATGGCTGCTATTGCTTATGATGTCGCCGCTCTTGCTCTTAAGGGTAACGATGCTGCCCTTAACTTCCCCGACTCCGCTTCTTCCCTCCCTGTTCCTGCCTCTTCTTCTGCCCGCGATATTCAAGTTGCCGCAGCCAGTGCCGCTGCTGCTCTCGGAGCCGCCAAAGACTCCATCGAGGGAAGCCGAGGAGCCGTGGCAGGGAATGCCGTTGCGCTGGAGCAAGAGTTGCCGCTCTCCCAAGCCAGGAACACTATTGACAACAATAATGAGTTTGTGGATGAGGATTTGATTTTTGATATGCCTAATGTTCTTCTCAATATGGCTGAAGGGATGCTTCTTAGCCCTCCTCGTTTTCATGTTGCCGATGACTACACTACTGCTCCAGAATACGTGCCGGAAGATCCACACCTCTGGAGTTACCCTTATTTCCCATGA | 603 | 0.524 | MRSNNTSSSSSSGSSGTGRHPLYRGVRRRSSGKWVSEIREPKKPTRIWLGTFSNPEMAAIAYDVAALALKGNDAALNFPDSASSLPVPASSSARDIQVAAASAAAALGAAKDSIEGSRGAVAGNAVALEQELPLSQARNTIDNNNEFVDEDLIFDMPNVLLNMAEGMLLSPPRFHVADDYTTAPEYVPEDPHLWSYPYFP | 200 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu06g01686 | 200 | ProSiteProfiles | AP2/ERF domain profile. | 22 | 79 | IPR001471 | GO:0003700|GO:0006355 | |
Adu06g01686 | 200 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024 | 5 | 197 | - | - | |
Adu06g01686 | 200 | CDD | AP2 | 21 | 81 | IPR001471 | GO:0003700|GO:0006355 | |
Adu06g01686 | 200 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Adu06g01686 | 200 | SUPERFAMILY | DNA-binding domain | 22 | 81 | IPR016177 | GO:0003677 | |
Adu06g01686 | 200 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 5 | 197 | - | - | |
Adu06g01686 | 200 | SMART | rav1_2 | 22 | 85 | IPR001471 | GO:0003700|GO:0006355 | |
Adu06g01686 | 200 | Gene3D | AP2/ERF domain | 22 | 80 | IPR036955 | GO:0003700|GO:0006355 | |
Adu06g01686 | 200 | Pfam | AP2 domain | 21 | 71 | IPR001471 | GO:0003700|GO:0006355 | |
Adu06g01686 | 200 | PRINTS | Ethylene responsive element binding protein signature | 23 | 34 | IPR001471 | GO:0003700|GO:0006355 | |
Adu06g01686 | 200 | PRINTS | Ethylene responsive element binding protein signature | 61 | 81 | IPR001471 | GO:0003700|GO:0006355 | |
Adu06g01686 | 200 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu06g01686 | Adu-Chr6 | 59651620 | 59652222 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu06g01686 | 18 | 197 | AP2-EREBP Transcription Factor Family | AT2G36450 | 63.536 | 1.97e-57 | 177 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Adu06g01686 | AP2 | 1.8e-11 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu06g01686 | - | - | gmx:100799620 | 239.965 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu06g01686 | 06 | 59651620 | 59652222 | Adu06g01686 | 06 | 59651620 | 59652222 | ECH | |
Adu06g01686 | 06 | 59651620 | 59652222 | Adu02g02738 | 02 | 93189145 | 93189711 | PCT | |
Adu02g02737 | 02 | 93184762 | 93185331 | Adu06g01686 | 06 | 59651620 | 59652222 | PCT |