Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01672 ATGGCACTCCATGACATAGATGCTGCAGTTGAAAGCTTTAAAAATGCATTGGTCTTAGAGCCAAATGATGAGAGAATTTTGGGCAACCCAAACCAAAGTTTGAAGTTAAAAAGACAAGAAACTGAGAACTCTGAGTGCCACAGTGAAGATATTGAGGAAGAATCAGTGGGTGTTAAAAAGGCATGTCCAACACGAGGTGTTAAGAGAAGTCGTTCAGCCGAAGTACATAATCTATCTGAAAGGAGGCGAAGAGACAGGATCAATGAGAAGATGCGTGCATTGCAAGATCTCATACCAAACTGCAATAAGGTTCGCTTATTTATACTTTCAAACCTTGAGCCATATTTGCTTCTCCTTGAGCCAAAAATGCAACCAGAGAAACAGAGAAATGAAACAAAGAGGCAGGAAGCATGGCAAGTATATGGGGCCTTGTTGTGTGCTGTTGGCCAATGTATGCATGAAAAGGCCAAAATCTTCAGCAATTTGCTCTCTCCTCCAACACGTGCTTCTTCTAGACCCAAAGCCATGATTGCTATGTCAAGGCTGATAGTGGAAAATATTTTCTTCTTGATAGAAGATAATGAACAAATGTATTGTAGCCGGCTTGATAGAAATTCCCTGACAGGAGAGGTTCCTACAAATCTTTGTAAGAGATGA 657 0.4079 MALHDIDAAVESFKNALVLEPNDERILGNPNQSLKLKRQETENSECHSEDIEEESVGVKKACPTRGVKRSRSAEVHNLSERRRRDRINEKMRALQDLIPNCNKVRLFILSNLEPYLLLLEPKMQPEKQRNETKRQEAWQVYGALLCAVGQCMHEKAKIFSNLLSPPTRASSRPKAMIAMSRLIVENIFFLIEDNEQMYCSRLDRNSLTGEVPTNLCKR 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01672 218 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 128 IPR011598 GO:0046983
Adu06g01672 218 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 70 138 IPR036638 GO:0046983
Adu06g01672 218 Pfam Helix-loop-helix DNA-binding domain 75 110 IPR011598 GO:0046983
Adu06g01672 218 Gene3D - 67 132 IPR036638 GO:0046983
Adu06g01672 218 PANTHER TRANSCRIPTION FACTOR PIF3 24 104 - -
Adu06g01672 218 PANTHER TRANSCRIPTION FACTOR PIF3 24 104 IPR044273 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01672 Adu-Chr6 58098614 58100510 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01672 29 124 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 60.396 4.32e-27 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu06g01672 HLH 2.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01672 K12126 - ahf:112696927 308.916