Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01664 ATGAGGCATCTTTTTGGAACTTGGAAGGGATACTTTCCTCCGCAGACCCTTCAGATGATTGAAAAGGAACTTGGCTTCACACCTGCAGTCAATGGTTCGGCTTCTTCATCTGCTACACTCAGAAGTGAATCACAGTCACAACGCCCAGCTCATAGCATCCATGTGAATCCTAAGTATTTAGAACGACAGCGTCTTCAGCAGTCCAGCAGGATTAAAGGAGTAGCTAATGATACGACTAGAGCTATTTTGAACTCAAATGAGGATTCAGAGAGGTCAAGTAGAGTTTTGGGTGCTTCACGACCGTGGCTAGATCCTAGGATTAACATGCATGTATGTAGGCGTATTCAAAGAGATGCATATAACAATTCTGTTCCTGAGAAGAGTTTAGCTGAATCCTATGGGGCCATAAAAAATAGTTCTGGTATTTCAAGTATTGGAACAACTGGCAGTAGGGTTACTGAGCTGGGACATGATAAAACTTGGTATAAAGCAGGAATCAGCGTGGCAGAGAACACGTCTAATCAAAGTAATGGTTTCAGTTTGAAGCTTGGTTTTTCGAATCGTGAAGCACCAAAGTCGATGAACTTGGGTGCACATCATCAGCCAACACAAAACTTAACTAGCATACAGAGCAGTGTAGTGCCAGGTAGCTGGAAAAATTCTGAGGAAGAGGAATTCATGTGGGATGAAATGAACTCTGGAATGATTGGTGATGGTGCAGCCAGCATTGCCAACAACATGAATACAGAACCATGGATGGGTGGTGATGATGAGAATTTGGATGGAGATCAATCCCAAATCTTGCACCATGATAGAGAAATATCTACTGCTAGGAAACAATCATTTGCATCTGGGGGGCATTCATCATTGCCATGGCAATTGCAGGAGCAGAGATCGAATGAAAAGTTGAATCTGAGGCCAGGTCACTCGGAAGAATTGTTGTCAGCTTTAGGTTGCTTACCAGCTAATACAAGTTCTTTGGTTGTCAGGATGCCAAATCAGTCTTCCATGCCAAATGCAACCAAAGATATGTCTGAAACTATGGGACAAAAGCAATTTGATTCCATGGGAACAAAACCCACTTCTGTGCAGTCACCTTTGCAGCAGCAGTCTGCATCATTGCCTGTAACAAAGCTCCACCCTCATCCAACACAAAATTTGTTGGAGCAAGACAATGGGAAGGCTTCTAAAACATCACAATTTCTGGGAGATCTGCAGAGACAATACATTAGAGATCAACCAGCTGCCCTTCCTCCCAATGCTCAAGTTGGTCGTTTGCATAGATCTAGAGAAAAGGATTTGCATGGTCCTTTATCTTCAGAGACTTCTTTTCTGCCAAGGCATCAGCAGCAGCCACTGGTCTCTTCCCAGACTGAAGTTATTGCAAAAACTAAGCCTCTCCACTCTAAAGTCTCTTTGGCCAGTGAAAGTTCAGAACAATCAAAAAGTAGTTTGTCAGCTGCAACTGTGCAGACTAGATTCCTCAACAAATCAATTACAAATAGTTTTCCTGGTACAAGTAGTAGTCTAGTTACAAAGAATCTTCCATCTGACTTGGGGGTTTGCCCAGCTCTATCAGGTAGACCCTCGTCTGCCACATTAATTTCTTCGGTATCTGCAGTTGCATCACCGTCAACATTAGTTCCTCCAGATGACGATTCTTCTATTCTGGATAACATATCACAAGCAAATACTGGACAGAAACCAAAGGTCTCTACAAAATTACCAACTTCCTCTAACATGAGCACTGTGTCAGCTCCAACCTCAACCGCTACAAAAAACAATTCCTTGAATCCCATTGCAAACCTTTTAAGCTCACTGGTTGCAAAAGGTTTGATATCTACAGATTCGGAGTCATCGACTAAGGTACCAACAGAGGCATTGGTTCAATTGGAAGCCCGTACTGAAAGCATTACTGCCAGTAGCTCATTGCCAGTTCCTTCAGTTACTGGTTCCACAGTTCTCCCAGTAACATCCTCTAAAGTTGTGGAAGATGATGCAAAAGCCTCCCTGATCGTAAGTCAATCAACCAACACCAAAATAAGGAATATCATCGGCTTTGATTTTAAGCCTGATATAGTTCGAGAGATGCATCCCACTGTAATCAAGGGATTATTGGATGATAGTCAGCATCATTGCAGATTTTGTGGTATTAAGCTTAAACAGGAAGAACAGTTCAACAAACACTTGGAGTGGCATTTTGCACGAGAAAGAGAGCAACATGGTCTAATTAGAGCATCCAGAAAATGGTATGAGAATTGGTTTCTGTCTGAGCCTAGTGATTCTGTAGACGATTATTGCGAGGAAACAGACAGGAGTCCATTTGATGCTATGGTTCCAGCTGATGAAAGCCAGTGCTTGTGTGTATTGTGTGGTGATCTGTTTGAAGATGTGTACTGTCAAGAGAGGGATGAATGGATGTTCGAAGGTGCTGTTTACATAAACAACTTAGATAGAAATGGTGAGATGGAAAGTAGAAATGTGGGGCCAATTGTTCATGCTAAATGTTTATCTGAGAACTCAGTAGCTGGCGGCATCAAGATGGAACAGGACTGA 2556 0.4253 MRHLFGTWKGYFPPQTLQMIEKELGFTPAVNGSASSSATLRSESQSQRPAHSIHVNPKYLERQRLQQSSRIKGVANDTTRAILNSNEDSERSSRVLGASRPWLDPRINMHVCRRIQRDAYNNSVPEKSLAESYGAIKNSSGISSIGTTGSRVTELGHDKTWYKAGISVAENTSNQSNGFSLKLGFSNREAPKSMNLGAHHQPTQNLTSIQSSVVPGSWKNSEEEEFMWDEMNSGMIGDGAASIANNMNTEPWMGGDDENLDGDQSQILHHDREISTARKQSFASGGHSSLPWQLQEQRSNEKLNLRPGHSEELLSALGCLPANTSSLVVRMPNQSSMPNATKDMSETMGQKQFDSMGTKPTSVQSPLQQQSASLPVTKLHPHPTQNLLEQDNGKASKTSQFLGDLQRQYIRDQPAALPPNAQVGRLHRSREKDLHGPLSSETSFLPRHQQQPLVSSQTEVIAKTKPLHSKVSLASESSEQSKSSLSAATVQTRFLNKSITNSFPGTSSSLVTKNLPSDLGVCPALSGRPSSATLISSVSAVASPSTLVPPDDDSSILDNISQANTGQKPKVSTKLPTSSNMSTVSAPTSTATKNNSLNPIANLLSSLVAKGLISTDSESSTKVPTEALVQLEARTESITASSSLPVPSVTGSTVLPVTSSKVVEDDAKASLIVSQSTNTKIRNIIGFDFKPDIVREMHPTVIKGLLDDSQHHCRFCGIKLKQEEQFNKHLEWHFAREREQHGLIRASRKWYENWFLSEPSDSVDDYCEETDRSPFDAMVPADESQCLCVLCGDLFEDVYCQERDEWMFEGAVYINNLDRNGEMESRNVGPIVHAKCLSENSVAGGIKMEQD 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01664 851 PANTHER RNA POLYMERASE II-BINDING DOMAIN PROTEIN 1 847 - -
Adu06g01664 851 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 1 847 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Adu06g01664 851 MobiDBLite consensus disorder prediction 333 370 - -
Adu06g01664 851 ProSitePatterns Zinc finger C2H2 type domain signature. 713 733 IPR013087 -
Adu06g01664 851 MobiDBLite consensus disorder prediction 543 591 - -
Adu06g01664 851 MobiDBLite consensus disorder prediction 32 52 - -
Adu06g01664 851 MobiDBLite consensus disorder prediction 413 451 - -
Adu06g01664 851 MobiDBLite consensus disorder prediction 32 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01664 Adu-Chr6 56444898 56451381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01664 685 850 C2H2 Transcription Factor Family AT4G04885 33.889 3.17e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01664 K14400 - gmx:100811629 843.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01664 06 56444898 56451381 Adu06g01664 06 56444898 56451381 ECH
Adu06g01664 06 56444898 56451381 Adu02g02743 02 93235117 93241523 PCT