Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01652 ATGGAATTAAGAAAACAACCAAAAGGAGGGGGAGGAGATGAAAATCCGTGTGAAGCTTCGTTTGGTCGAACTGCACGGAGACGGCGGTGCACGGCGGAGGAGAAGGCGGGGTTGAACGGCACGGAAGCAGAGATCGAGATCTGGCTATCTCGAGGTTCAAATAAGGGAAGGAAACAGACCACCCAGGGCAACGAGATTCACAGCTACGAATTTTCATCTAAGTTTGACCGAGTCCACGCGTTGCAGGATGCTAATGGTTGGATGAGCGGCGAAACCGTGCTGGTAGAGGAAGCAGAAGCGATGGATTCGTACACCGCAGATGCGGACATAGATGCAGAAGTAGCAGTGAGGATTATTGACGGGATAGGGTCCTTTGGTGCAATTGAATTTTCTTCCCTAACAGCCAAGGACGTGCTGACGACGGAGTTCACAAGCCTACAGGCAGCTTATGACTACTACAACGAATTCGGTTGCATGAAGGGATTTTTGGTCAGGATGTCCAAGGTGGGTCGCATAACAAAGCAGGGGGCGGAGGGCAAAATAATTTGGCAGATATTCGTGTGCTCCAGGGAAGGAGAGCACGACGGGAAACACATGCATCGGGAAGATAGGAAAAAGGATCCTCGACCGATCACGCAgaacaatctgagggagtttgtcgagcacttccaacactatttagagttcatgaggaggagAGAACTAGTGGCAGACTACAAGTCTGCGTATGGTGAGCCTGTTGTGAAGATGAAACTCGAGGCCATTGAGCAGTTCGCTGCAACGGTTTATACAAGAGAGATTTTCAAACTGTTTCGGGAGGTGCTGATGCTAGCCAGCAACGTTAGAGTTGTGTCCACCAAGAGGACAAGCGCTTGTGTTTTGTTCGAAGTTGCAATGTACTGCAAGCAGAGATCAGGGGCCATGTCGTGGGCCGAGgaagacgatgaattcagctgttcttgtcagcggatggagtcctttgggcttccttgtgtccacatggttggggttctggtttatctgaacatgacagctatccccaaaggcctaatacttgactggtggacaaaaagggctaagCAGCCGCGTGCACCCTGCCACGGAACTCGTGTTGGGGAGATCCCAAACGCGGCATACATGAGCATGCACGCGGCGATGCTGGATGATTGCAGGGAGCTGGAGCGTCAACCCCTGCGGGACAAACATCGCCAAAGGTTGGGTGTTGCTGAGGAGGCCAGCAGGGTGTCTGCTCGGGACCCGATGTGGGCAAGGTACAAAAGATGCGGTCGAAGAGTTGTCACCTCCCGGGTAAAGTTTCACCGTCTTCAGAGGTGTCGACTGTGTGAAAAGGGCGGACACAATTCTCGCAAGTGTCAACAATCGAGTACGGGGAGAACATCGACAACTTTAAGGCTGGCGCAGCTTACAAAAGCATGGAGGCAGGAGAGGGGGGTGAGGTGTACTACGAATTTGAGTGAGCTGGCTGAACCGTTCTTGTTGGCGGTTACGCATTAA 1515 0.4541 MELRKQPKGGGGDENPCEASFGRTARRRRCTAEEKAGLNGTEAEIEIWLSRGSNKGRKQTTQGNEIHSYEFSSKFDRVHALQDANGWMSGETVLVEEAEAMDSYTADADIDAEVAVRIIDGIGSFGAIEFSSLTAKDVLTTEFTSLQAAYDYYNEFGCMKGFLVRMSKVGRITKQGAEGKIIWQIFVCSREGEHDGKHMHREDRKKDPRPITQNNLREFVEHFQHYLEFMRRRELVADYKSAYGEPVVKMKLEAIEQFAATVYTREIFKLFREVLMLASNVRVVSTKRTSACVLFEVAMYCKQRSGAMSWAEEDDEFSCSCQRMESFGLPCVHMVGVLVYLNMTAIPKGLILDWWTKRAKQPRAPCHGTRVGEIPNAAYMSMHAAMLDDCRELERQPLRDKHRQRLGVAEEASRVSARDPMWARYKRCGRRVVTSRVKFHRLQRCRLCEKGGHNSRKCQQSSTGRTSTTLRLAQLTKAWRQERGVRCTTNLSELAEPFLLAVTH 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01652 504 ProSiteProfiles Zinc finger SWIM-type profile. 295 342 IPR007527 GO:0008270
Adu06g01652 504 SMART 26again6 317 344 IPR006564 GO:0008270
Adu06g01652 504 Pfam SWIM zinc finger 318 341 IPR007527 GO:0008270
Adu06g01652 504 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 214 362 IPR031052 GO:0006355
Adu06g01652 504 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 214 362 - -
Adu06g01652 504 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01652 Adu-Chr6 54360146 54363193 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu06g01652 SWIM 0.00014 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01652 - - ahf:112777976 390.578