Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01630 ATGAATAGTGGTAGGAGAAAACTGGGCACAACTCCTGAAATTGATCACACATATTGGTTGATTGTTAGTGCTAATCGCGATTGTGCCCCTGCTATTCGCATTCGTGTTGTTGCTGCTGCTATTGGCAAGCTCAATGCACCTCAACCCCATTCCTCTCTGAAATTGAAAGAAAAAAGCAACTCAAGCTCTACATACCCATTGACCCAGCCCCGCCGCCCGCACACCGCAGCCACTCCAACTACCGCAGCCACCTCAATTTTGGTGTATGTTCATTTTTGGGAGATGGAGCCATCGGATAGCGACTTTTTTGCAATAGACTCCGATGAGGAGTTCCTAACAGGAGACGATCTAGATTTTTTAAACAACGATTCAGAGGCTGATGAAGATAGACCTCAAGATAAGAGAATAGCAGAGCTGTCACGAGAAGATATCATGCAACTTCAGTTTACAGATGAGGAAGCTGTTTATCGATTCTACAAGACTTATGCAATGATGCACAGTTTTGCTGTGAGGTTGGATGAAGTCAGACACGATAGCGATGGTTCCATAATTATGCGCCAAATTGTTTGCAATCGGGCGGGCATAAGAAATGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCGACCCCTAACTCGAAGTTATTTCTGGGCGAGAATTCGTGCAAGACTGGATAAAAAAATTCAGAAATGGAAGGTTGTTTCTTTCTACGAAGAGCGCTCTCATGAATTAGTTGCTCCACTCGACGTTAGCATGATGCCTGAgaatacatgcgaaaaggttaagaaCAGTGGATTTCTAAAGAACTTCAAGCAATTGATTTATGCCAATGTGAGTGTTGAAGAGTTCCAGGTCATGTGGGAAGACATGGTGGTCAGGATGATGGATTTGTCCTGTAAGAACTTAAGTGATTTTGTCGAAACAATGAATAGTGTTGTCGACACAATTACAAAACTCCAAAAGCGAGGTGAAAATCCATGCAACGCTAACTTAGATGATGATTACGTTGGGCACTACAACAAAAGTTGTCATAATGCTCCTGGTAGAATCCCAAAGGAGCCAATAGACGATGATACAGAAAAGAATATCAGCAGCATCCTCCCTAAGAATAAGATGGAAAAAGATAGGAACATTGGTGGTGGAACAGCACCAACCTCAGCAGCTAAGTCGACTTCTATTGATCAAGTGAAAACATCAAGTCTTGGTCCCAATATCCCGGTTTGTGCATCTACAAGTAACGAAGAGTCTGTGATGGGTTCCAGACCAGCTGAGTCTTCTGTTGTGGCCCTTGAAACAGGAATGGCAGATTGA 1314 0.4269 MNSGRRKLGTTPEIDHTYWLIVSANRDCAPAIRIRVVAAAIGKLNAPQPHSSLKLKEKSNSSSTYPLTQPRRPHTAATPTTAATSILVYVHFWEMEPSDSDFFAIDSDEEFLTGDDLDFLNNDSEADEDRPQDKRIAELSREDIMQLQFTDEEAVYRFYKTYAMMHSFAVRLDEVRHDSDGSIIMRQIVCNRAGIRNEEVEKDERIRDHRPLTRSYFWARIRARLDKKIQKWKVVSFYEERSHELVAPLDVSMMPENTCEKVKNSGFLKNFKQLIYANVSVEEFQVMWEDMVVRMMDLSCKNLSDFVETMNSVVDTITKLQKRGENPCNANLDDDYVGHYNKSCHNAPGRIPKEPIDDDTEKNISSILPKNKMEKDRNIGGGTAPTSAAKSTSIDQVKTSSLGPNIPVCASTSNEESVMGSRPAESSVVALETGMAD 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01630 437 MobiDBLite consensus disorder prediction 384 421 - -
Adu06g01630 437 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 123 250 - -
Adu06g01630 437 MobiDBLite consensus disorder prediction 52 78 - -
Adu06g01630 437 MobiDBLite consensus disorder prediction 370 437 - -
Adu06g01630 437 Pfam FAR1 DNA-binding domain 157 246 IPR004330 -
Adu06g01630 437 MobiDBLite consensus disorder prediction 48 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01630 Adu-Chr6 52592182 52598020 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu06g01630 FAR1 7.4e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01630 - K17604 aip:107620373 291.582