Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01615 ATGGAAGCGAATGGAATAGGTAGTGGAATTTACACTAGCATAAACACTTCATTGCTAGGAATAGAGAATAACACATTACAGCAAAACCCACACAACAATTTGCATCATCAACCTCCTCCTCCTCAAATGGTTTATTCTACACACCATGACACTGAATCACACCCTTCACAACAGCAACAACAACAGCAACCACAGCAAGCAATGAAACATGGATACCCTTATTCTTCCAAGAAACCACAGAGCAGCACCTTCAGTGATGAAGATGAACCTGGTGGTGGTTTCGGTGCAGATGAAAGCTCTGGTGACCCGAAGAGGAAGGCCTCGCCATGGCACAGGATGAAGTGGACCGACGCCATGGTTAGGCTTTTGATAATGGCGGTTTACTACATCGGAGACGAAGCTGGTTCAGAAGGTGTAGGAGGAGGAGGAGGCGGCGGTGTTGATCCAAGTGGGAAGAAGAAGAACACCGGATTGCTTCAGAAAAAAGGGAAGTGGAAATCAGTATCGAGGGCTATGATGGAGAAAGGGTTCTACGTTTCTCCTCAGCAATGTGAAGATAAATTCAATGATTTGAACAAGAGGTACAAGAGGGTCAACGATATTCTTGGAAAAGGAACAGCTTGTAGGGTGGTTGAGAATCAGAGCTTATTGGAAACCATGGATTTGTCGCTAAAGATGAAAGAAGAGGTGAGGAAGCTTCTCAATTCTAAGCACCTTTTCTTTAGGGAAATGTGTGCTTACCATAACAGTTGCGGCCACGGCGGTGGTGCTGCTGCTGTTACTGCCGCTGGTAACGGGCAGCACTCGGCTGAGGCGGGAACAGAACAACCTTTACAGATTCAACAACCGCAACCGCCACAACATCAGCAGGGACAGCAGAGATGCTTCCATTCATCGGTGAATGGGGTTGGGATGCTGAAAGAGGACGATGATGACGAGGAGGACTATGAATCTGACGATTTCTCTGACGAGGATGAAGAGGAATCAGGAGAAGGTGGTGGATCAAGGGGTCAAGTAGAGGATGATGAGAATGATGTAGTGAGGTCAAGGAAGAGACACAGGAACAAGGGAGGGTTCTGTGTGACGTCATCATCAACATCAGCATCTCAATTGATGCAGCAGTTGAACAACGAGGTTGCTGGGGTGCTGCAAGATGGGGGAAAGAATCCATGGGAGAAGAAGCAGTGGATGAAGAAGAGGGTGCTCCAGCTGGAGGAGCAGCAGGTGAGGTACCATGTGGAGGCCTTTGAGCTTGAGAAGCAGAGGCTCAAGTGGGTTCGGTTCAGTTCCAAGAAGGAGAGGGACATGGAGAGGGACAAGCTGGAGAATGAGAGGAGGAGGCTGGAGAATGAGAGGTTGCTCTTGCTTCTTCGCCAAAAGGAGCTTGAATTCACTGCTCTTCATCACCTCAAGCACCAACAACAGCAGCAACATTCTTCTACCTAG 1446 0.482 MEANGIGSGIYTSINTSLLGIENNTLQQNPHNNLHHQPPPPQMVYSTHHDTESHPSQQQQQQQPQQAMKHGYPYSSKKPQSSTFSDEDEPGGGFGADESSGDPKRKASPWHRMKWTDAMVRLLIMAVYYIGDEAGSEGVGGGGGGGVDPSGKKKNTGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQSLLETMDLSLKMKEEVRKLLNSKHLFFREMCAYHNSCGHGGGAAAVTAAGNGQHSAEAGTEQPLQIQQPQPPQHQQGQQRCFHSSVNGVGMLKEDDDDEEDYESDDFSDEDEEESGEGGGSRGQVEDDENDVVRSRKRHRNKGGFCVTSSSTSASQLMQQLNNEVAGVLQDGGKNPWEKKQWMKKRVLQLEEQQVRYHVEAFELEKQRLKWVRFSSKKERDMERDKLENERRRLENERLLLLLRQKELEFTALHHLKHQQQQQHSST 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01615 481 MobiDBLite consensus disorder prediction 267 299 - -
Adu06g01615 481 MobiDBLite consensus disorder prediction 25 108 - -
Adu06g01615 481 PANTHER F16F4.11 PROTEIN-RELATED 1 481 - -
Adu06g01615 481 MobiDBLite consensus disorder prediction 44 87 - -
Adu06g01615 481 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 481 - -
Adu06g01615 481 MobiDBLite consensus disorder prediction 261 365 - -
Adu06g01615 481 MobiDBLite consensus disorder prediction 331 350 - -
Adu06g01615 481 MobiDBLite consensus disorder prediction 139 161 - -
Adu06g01615 481 Pfam Myb/SANT-like DNA-binding domain 112 246 IPR044822 -
Adu06g01615 481 Gene3D - 115 197 - -
Adu06g01615 481 Coils Coil 431 458 - -
Adu06g01615 481 MobiDBLite consensus disorder prediction 307 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01615 Adu-Chr6 50604798 50607067 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Adu06g01615 Myb_DNA-bind_4 3.3e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01615 - - aprc:113863792 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01615 06 50604798 50607067 Adu06g01615 06 50604798 50607067 ECH
Adu06g01615 06 50604798 50607067 Adu02g02759 02 93383251 93385583 PCT