Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01614 ATGGAGTGGAATGAAAGCACAAGATCCTTTGCTCCTCGTGCTGAGTCTTCACTAAGCTTCTTTCACAACTATAGCAGCAGTAGCAGCAACAATAACAATAGCAGCAACCCATCATATCCAAGAAGTGAAGTGAAACAAGCAGCATTGGTGGAGACACCACAAGAGTCGCTTCATGCAATGGCGGAAGTAAAGTACGCGGGCCACCGCGAGAAGAAGAAGCGGTTAACAAGCAGCCAGATTGAGTCATTGGAGAGAAGCTTTCAGGAGGAGATAAAGTTGGACAGTGACAGGAAGATAAAGCTTTCCAGGGAGCTTGGCCTCCAGCCTCGCCAAATCGCGGTTTGGTTCCAGAATAGGCGAACAAGGTGGAAGGCCAAGCAGCTTGAGCACTTGTACTTTGCCCTTAAACACGAATTTGATCACATCTCCAATGAGAAGCACAAGCTTCAAGAAGAGGTAGTAGTAGATCTTTGA 474 0.4705 MEWNESTRSFAPRAESSLSFFHNYSSSSSNNNNSSNPSYPRSEVKQAALVETPQESLHAMAEVKYAGHREKKKRLTSSQIESLERSFQEEIKLDSDRKIKLSRELGLQPRQIAVWFQNRRTRWKAKQLEHLYFALKHEFDHISNEKHKLQEEVVVDL 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01614 157 CDD homeodomain 69 127 IPR001356 GO:0003677
Adu06g01614 157 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 1 154 - -
Adu06g01614 157 PRINTS Lambda-repressor HTH signature 106 122 IPR000047 GO:0003677
Adu06g01614 157 PRINTS Lambda-repressor HTH signature 97 106 IPR000047 GO:0003677
Adu06g01614 157 SMART HOX_1 68 130 IPR001356 GO:0003677
Adu06g01614 157 Pfam Homeodomain 69 124 IPR001356 GO:0003677
Adu06g01614 157 MobiDBLite consensus disorder prediction 21 46 - -
Adu06g01614 157 ProSitePatterns 'Homeobox' domain signature. 101 124 IPR017970 GO:0000981|GO:0006355
Adu06g01614 157 Gene3D - 66 131 - -
Adu06g01614 157 MobiDBLite consensus disorder prediction 21 42 - -
Adu06g01614 157 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 154 IPR045224 GO:0003700
Adu06g01614 157 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Adu06g01614 157 SUPERFAMILY Homeodomain-like 56 128 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01614 Adu-Chr6 50339936 50340887 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01614 1 155 Homeobox Transcription Factor Family AT5G03790 50.000 1.68e-43 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Adu06g01614 Homeodomain 8.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01614 - - adu:110272999 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01614 06 50339936 50340887 Adu06g01614 06 50339936 50340887 ECH
Adu02g02761 02 93407184 93409225 Adu06g01614 06 50339936 50340887 PCT