Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01613 ATGGTCCTCAAGACGGAACTTTGCCGCTTTAGTGGCGCCAAGATCTACCCTGGGAAGGGCATCAGATTCGTTCGTGGTGATTCTCAGGTCTTTCTGTTTTCAAACTCGAAATGCAAAAGGTATTTCCACAATCGTTTGAAGCCATCAAAGCTCACATGGACTGCCATGTATAGGAAGCAACACAAAAAGGACATTGCTCAAGAAGCTGTGAAGAAGAAGCGTCGTGCTACCAGGAAGCCATACTCTAGGTCAATTGTTGGTGCTACCTTGGAAGTTATCCAGAAGAGAAGAACCGAGAAGCCTGAAGTTAGAGATGCAGCAAGGGAAGCTGCTCTTCGTGAAATTAAAGAGAGGATCAAGAAGACAAAAGATGAGAAAAAGGCTATGAAGGCAGAGGTATCGGCTAAGCAACAAAAGGCACAGGGCAAAGGCCATGTTACAAAGGTTGCTGCACCGAAAGGTCCCAAACTTGGTGGAGGAGGTGGCAAACGCTGA 495 0.4667 MVLKTELCRFSGAKIYPGKGIRFVRGDSQVFLFSNSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKKRRATRKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKKAMKAEVSAKQQKAQGKGHVTKVAAPKGPKLGGGGGKR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01613 164 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Adu06g01613 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Adu06g01613 164 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Adu06g01613 164 PANTHER LOW QUALITY PROTEIN: 60S RIBOSOMAL PROTEIN L24-LIKE 1 164 - -
Adu06g01613 164 MobiDBLite consensus disorder prediction 121 164 - -
Adu06g01613 164 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Adu06g01613 164 Coils Coil 112 139 - -
Adu06g01613 164 Gene3D - 69 148 - -
Adu06g01613 164 SMART 4TRASH 8 46 IPR011017 -
Adu06g01613 164 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Adu06g01613 164 PANTHER 60S RIBOSOMAL PROTEIN L24 1 164 IPR000988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01613 Adu-Chr6 50303878 50305466 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01613 1 157 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 82.803 2.63e-86 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01613 K02896 - gmx:100499884 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01613 06 50303878 50305466 Adu06g01613 06 50303878 50305466 ECH
Adu06g01613 06 50303878 50305466 Adu02g02762 02 93411038 93413073 PCT