Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01599 ATGGAACCACTTAAGGAGAGTGTGTTTTCCGGTTCAACCGCGAACACAAACTCCGATACACCGCTAACTACCCAGTTTCCACCCCAGGTGATGAACTTGAACTTTGGAAACCTTGGAGGAGGACCGCAACCACCACCACCACCACCACAACCGCAACCACAGCCACCACGGGAACAACCACAAGCGCCACCAGGCACAGCTACAATGTCACCGGCAACAACAGGAACAGGTGGTGCTTCGGGGCAAGGGAGTTTGGAGTTGTTTGGGAAGAAGAAGAGAGGGAGACCAAGAAAGTATGACTCCGAAGGGAACCTCAGGGTGCCAAACCAACCACCACCGGGATTCTCTCTAACTCCGGGTTCGGGTTCGGGTTCAGAGTTTTCATCAAAACGGGGTCGTGGCAGTAGTGCAAAGTCACATGCTTCTGGAAGCTGGAACCTTCTTTCTTCTTTGGGCTTGCTTGGAAGCACAACTGGTACTGATTTTACACCTCATGTTGTGACAGTTAATGCTGGAGAGGACGTTGCTGGAAAGATTTTCTCGATTGCACAGAAGGGTCCTATGGGAATATGCATTCTTTCTGCAAATGGAGCTATATCTAAAGCTACCTTGCGCCAACCTGGTTCTTCTGGTGGCCTATTAACATACGAGGGTCGATTTGAGCTTTTATCCTTGTCTGGATCATTCACAGTCCCGGATAGTAGTGCTGCAATTCCTTCTAGTGGATTGAGTGTCTCACTGGCTGGTCCTGATGGTCGCGTGATAGGAGGGGGTGTTGCTGGTTTATTGACAGCTGCTACCCCAATCCAGATTGTAGTGGGAAGCTTCATGCCAAATGGTCAAAAGCCCCAAAAAAGGAAATATACCCGTCAACCGGTAGCCTCTCATGCTGCTTCAGGACCTATGGCAACAGTATCAGCTGCAGGACCTATCTCACAATCAAATCCTGGTGGTGAAAATCCTCTGGGATCTTTATCTCAGTTGCCAGACCAAGGTCAGAGAGAATCAGTCAGCGCATCGAGCGATAAACTGAATTTAGATGATACGCTTAATGGTGATAATTGGAATGATACTGAAGATTTTTCGGATCATAGGCCATCCCCAGACATCAACATATCTTTGCCTGATGAATAG 1134 0.4859 MEPLKESVFSGSTANTNSDTPLTTQFPPQVMNLNFGNLGGGPQPPPPPPQPQPQPPREQPQAPPGTATMSPATTGTGGASGQGSLELFGKKKRGRPRKYDSEGNLRVPNQPPPGFSLTPGSGSGSEFSSKRGRGSSAKSHASGSWNLLSSLGLLGSTTGTDFTPHVVTVNAGEDVAGKIFSIAQKGPMGICILSANGAISKATLRQPGSSGGLLTYEGRFELLSLSGSFTVPDSSAAIPSSGLSVSLAGPDGRVIGGGVAGLLTAATPIQIVVGSFMPNGQKPQKRKYTRQPVASHAASGPMATVSAAGPISQSNPGGENPLGSLSQLPDQGQRESVSASSDKLNLDDTLNGDNWNDTEDFSDHRPSPDINISLPDE 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01599 377 MobiDBLite consensus disorder prediction 63 81 - -
Adu06g01599 377 MobiDBLite consensus disorder prediction 116 142 - -
Adu06g01599 377 CDD DUF296 163 276 IPR005175 -
Adu06g01599 377 Gene3D - 164 291 - -
Adu06g01599 377 MobiDBLite consensus disorder prediction 8 32 - -
Adu06g01599 377 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 52 376 IPR039605 GO:0003680
Adu06g01599 377 MobiDBLite consensus disorder prediction 88 102 - -
Adu06g01599 377 MobiDBLite consensus disorder prediction 276 377 - -
Adu06g01599 377 MobiDBLite consensus disorder prediction 1 142 - -
Adu06g01599 377 Pfam Plants and Prokaryotes Conserved (PCC) domain 164 276 IPR005175 -
Adu06g01599 377 MobiDBLite consensus disorder prediction 306 356 - -
Adu06g01599 377 MobiDBLite consensus disorder prediction 40 62 - -
Adu06g01599 377 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 52 376 - -
Adu06g01599 377 ProSiteProfiles PPC domain profile profile. 159 297 IPR005175 -
Adu06g01599 377 SUPERFAMILY AF0104/ALDC/Ptd012-like 161 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01599 Adu-Chr6 47636515 47640084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01599 90 351 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 43.525 3.02e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01599 - - gmx:100779227 343.584