Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01542 ATGGATGTTGACTCGGAACCACTCAGTTCACAAGACAACGTCGAAGATCCCATGATGACTAGTGTGGAAGAAAATGTTAACTGCACTTGTGATTGTGGTGGCAATAGTAGTAAGTGTATGTCTGTGACGGCCGATGATATTATAAACCAGACCTTTGAAACATCAGATGCAGCTTATAACTTGTATGTACGTTATGCGAGGTGTCTCGGGTTTGGAGTTCGCAAGGGTGATACAGCACGTGGAAAAGATGGAACACAGCGCAGAAGGAGGTTTTTTTGCAGCAAGGAAGGAAAGAGAGCCGAGAAATACATATCTAGTTTGAGTAGGAAGCGGGAGCATAGAGCGCTGACTCGCACTGGTTGTGAAGCCATGCTTGCGGTGTATCTTGACACTAAAACTTCGACTTGGAGGGTTAAAAAATTAGTCGAGAAGCACAACCACGATCTTGTCCCATAA 456 0.4474 MDVDSEPLSSQDNVEDPMMTSVEENVNCTCDCGGNSSKCMSVTADDIINQTFETSDAAYNLYVRYARCLGFGVRKGDTARGKDGTQRRRRFFCSKEGKRAEKYISSLSRKREHRALTRTGCEAMLAVYLDTKTSTWRVKKLVEKHNHDLVP 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01542 151 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 6 149 - -
Adu06g01542 151 Pfam FAR1 DNA-binding domain 61 151 IPR004330 -
Adu06g01542 151 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 6 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01542 Adu-Chr6 37756853 37757308 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu06g01542 FAR1 6.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01542 - - adu:107493692 313.153