Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01534 ATGTTTGATGAAGTGAAAAAAGCCTCTGCATCTTGCATTCCTTATGTCAAAGCCTATGAGGATTTATCATTCTGTATGTTGGTTGAGGAAAGAGCAGCCAATGAGGCAACGCAAGTTTGGTCTGCTGAATCTGTCTTGAAATTCTTGATGGAAAGGAATAGTGTCAATGCCCTTCATGGTCAGGTTACAAGTGGAACACTGATTCTGCAGATAGGGGAGAAAGGGGTTAACCTGAGTGGAGGCCAGAAGCAATGGATTCAGCTCGGTCGTGCTCTTTACCAGAATGTTAATATATACCTCTTGGATGATCCATTTAGTGCTGTTGATGCAGATATTGCCACAAATCTTTTTAATAAGCATAGCGGTAGTGAGACACTTGACACGGTAGAGTGGCATTCTTGGGTTTTTTTCTGGTCAATGACGGGAGTTTCTATAGTTAACTATGGTGAAATCACATGCTCCACATTATCTCCTTCCCTTTCATTGGGAACATCATCTTCCGGTGGAATCACTGCATCTGATGCAGCCTCTGAGAGGATCAAAGCTGGCTTCATTCACTTCAAGAAAGAGAAATATGACAAGAACCCTGCTTTATATGGTGAACTTGCCAAAGGACAAGCCCCCAAATTCATGGTGTTTGCTTGCTCTGATTCAAGAGTGTGCCCATCTCATGTGTTAGATTTCCAGCCCGGTGAGGCCTTTGTGGTTACAAATGTTGCTAACATTGTCCCACCATATGACCATACAAAATACGCTGGAGCTGGTTCTGCTATTGAGAGTACATGGGATTCAACCTTCTCTGCTGATTCCATCTCAATCCAAGCACAAGCAGAAGCAGCTCCACCTCTCCCACGTGTTGTGATCTCATTGGTCATAAACCAAGCCATTGGTGACGAGGAGGTAGATCCCGAGGAGGGAATGTGCTTCGGCACATTAGAAGATGCGCGTGCATATTACTACCGATATGCGGCTAGGGCTGGATTTGTCGTCAAAATAAGAACCACGGGCTGGGAGACCATAAACGATCAGAGGGTGGTTGTTAATCAAGCTTTGCATTGTAACAGAGATGGATACCGCACATCCCGTGTAAAGGCACCCCAGAGAAGGAAAACAATGGCCTCAACAAACTGCAAAGCCCGTTGCTATTTGGCATTAGATAAAATGACAGGGCAGTGGAGAATTTCTCGAGTAGAGGATTTTGTGGCTACTCCAGAGGTTGCTGCTATATTGCGTGATGCCATGGACAGTGCTCGGGAGAAGCTCAGAGAACACAAGGAATTCGAGCATCAAGTTGCACATGTACCAAGTGCGATTTACTCACATACGCATTATGAGTGTCCCGTTAGCATGGATGAGCTACATGGCCCACGTCGTGTTCCTACGCGAGGTCGTCCAACTTCCACCAGACTTGGGGCAGATCTGGAAAAATCTATTAAAAAGAGGGCACGCAAAATCAAGAACACTCACAATCACAACAAGGGACCTAATGGTAATGCACAACCATCTCCTACAAATGTGGCAACTTCCTACAAAGATACGCAACCGGCTTGTTCAGAAATGACAGACAATTCGGCTATGCACTCTGGCTCTTTCATATCACTATTGAATTCATTCCATAACGCTGAACAATTGTGTATGTGTACCTAG 1647 0.4499 MFDEVKKASASCIPYVKAYEDLSFCMLVEERAANEATQVWSAESVLKFLMERNSVNALHGQVTSGTLILQIGEKGVNLSGGQKQWIQLGRALYQNVNIYLLDDPFSAVDADIATNLFNKHSGSETLDTVEWHSWVFFWSMTGVSIVNYGEITCSTLSPSLSLGTSSSGGITASDAASERIKAGFIHFKKEKYDKNPALYGELAKGQAPKFMVFACSDSRVCPSHVLDFQPGEAFVVTNVANIVPPYDHTKYAGAGSAIESTWDSTFSADSISIQAQAEAAPPLPRVVISLVINQAIGDEEVDPEEGMCFGTLEDARAYYYRYAARAGFVVKIRTTGWETINDQRVVVNQALHCNRDGYRTSRVKAPQRRKTMASTNCKARCYLALDKMTGQWRISRVEDFVATPEVAAILRDAMDSAREKLREHKEFEHQVAHVPSAIYSHTHYECPVSMDELHGPRRVPTRGRPTSTRLGADLEKSIKKRARKIKNTHNHNKGPNGNAQPSPTNVATSYKDTQPACSEMTDNSAMHSGSFISLLNSFHNAEQLCMCT 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01534 548 PANTHER CARBONIC ANHYDRASE 170 259 IPR001765 GO:0004089|GO:0008270
Adu06g01534 548 Gene3D Carbonic anhydrase 165 264 IPR036874 GO:0004089|GO:0008270
Adu06g01534 548 PANTHER BETA CARBONIC ANHYDRASE 2, CHLOROPLASTIC 170 259 - -
Adu06g01534 548 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 118 IPR027417 -
Adu06g01534 548 SUPERFAMILY beta-carbonic anhydrase, cab 174 251 IPR036874 GO:0004089|GO:0008270
Adu06g01534 548 MobiDBLite consensus disorder prediction 491 521 - -
Adu06g01534 548 Pfam Carbonic anhydrase 211 252 IPR001765 GO:0004089|GO:0008270
Adu06g01534 548 Gene3D - 16 130 IPR027417 -
Adu06g01534 548 SMART Pro_CA_2 203 302 IPR001765 GO:0004089|GO:0008270
Adu06g01534 548 MobiDBLite consensus disorder prediction 486 521 - -
Adu06g01534 548 Pfam FAR1 DNA-binding domain 318 398 IPR004330 -
Adu06g01534 548 Pfam ABC transporter 70 105 IPR003439 GO:0005524
Adu06g01534 548 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 215 222 IPR015892 GO:0004089|GO:0008270|GO:0015976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01534 Adu-Chr6 36353762 36361616 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01534 41 70 Antiporters AT2G19600 76.667 4.09e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu06g01534 FAR1 8.9e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01534 K01673 - adu:107493576 216.853