Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01533 ATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACACGGTGTGTGGTCATAAACCAAGCCATTGGTGACGAGGAGGTAGATCCCGAGGAGGGAATGTGCTTCGGCACATTAGAAGATGCGCGTGCATATTATTACCGATATGCGGCTAGGACTGGATTTGTCGTCAAAATAAGAACCACCGGCTGGGAGACCATAAACGATCAGAGGGTGGTTGTTAATCAAGCTTTGCATTGGAACAGAGATGGATACCGCACATCCCGTGTAAAGGCACCCCAGAGAAGGAAAACAGTGGCCTCAACAAACTGCAAAGCCCGTTGCTATTTGGCATTATATAAAATGACAGGGCAGTGGAGAATTTCTCGAGTAGAGactaatagGTACGACATGCCGTTTGGGTCTTTCGTAGGTGTCAACCACCATGGGATGTCTACGCTTCTTGGGTGCGCATTATTGCGGAATGAGGACACTCGTACATTCGAATGGCTTTTTCGTACTTGGTTGAAGTGTATGGGTAAGGCCCCCATATGTGTTATAACAGACCAATCGCTGCAGATGCGTTCTGCATTAGAGACCACATTACCACACACACGCCATAGATGGTGCATATGGCATATCCTAAACAAGATACCAAACAAGCTGGTAGGTTACCGTCATTTCGATCAGCTCATCACATGCATGAAGAGGATTGTGTTTGAATCCAAATCTAAGGACTCATTTGAGAGAGATTGGCATGATTTTATTGAAGAGTATGATCTCCATAATTCTAGGTGGCTAAATGGTAGTATAATCTTCTGGTTCCTTGCTGCCTCTGTGTGGCTACTTTATAGATGTTATTTTATAGTCATTATGGATGTTGCACTTAGAGACAAGGAGCAAAAGAAGCTTGAGTGTGACGCTGCTGATTTAAGGGGTATTATCCCTTGTGTTTCCAGCTCACCAATAGAGAAGCAGTTTCAGAGAGAATATACAAACTCCATGTTTCGAGACGTTCAGGATCAATTTATAAAAAAGGCCGATTGTGACATCTCCTTAATCAACCATCATGGCACAAGTATAATTTGTGAAGTTGACCAACAAAAGATGGTGTTTGACATGTCAGTGTACAGCAGATACCAAGTCGTGTATTGCTCTCAGTCATCAGATGTTCAATGTGATTGCTTTATGTTCCAATCGAATGGTATTCTATGCTGCCACAGTCTTGCTGTTCTTCTACATTTTCGTGTGACAGCAGTGTCCTCACAATACATTCTATCCCGATGGAGTAAGAATGTTAGTCGGAGACACACATACATCAGGAGTAGCATTGACATGGACCGTTCTGATGAAAGCATGACAATTTTTATGCAATTGTGTTCTGATTTTTACAACATCGCTCAGGATTTTGTGGCTACTCCAGAGGTTGCTGCTATATTGCGTGATGCCATGGACAGTGCTTGGAAGAAGCTCAGAGAACACAAGGAATTCGAGCATCAAGCTGCATATGTACCAAGTGCGATTTACTCACATACGCATGATGAGTGTCCCGTTAGCATGGATGAGCTACATGGCCCACGTCGTGTTCCTACGCGAGGTCGTCCAACTTCCACCAGACTTGGGACAGATCTGGAAAAATCTATTAAAAAGAGGGCACGCAAAAACAAGAACACTCACAATCACAACAAGGGACCTAATGGTAATGCACAACCATCTCCTACAAATGTGGCAACTTCCTACAAAGATACGCAACCGACTTGTTCAGAAATGACAGATAATTTGGCTATGCACTCTGGCTCTTTCATATCACTATTGAATTCATTCCATAACGCTGAACAATTGTGTATTTGTACCTAG 1848 0.4286 MKKKKKKKKKKKKKKKKTRCVVINQAIGDEEVDPEEGMCFGTLEDARAYYYRYAARTGFVVKIRTTGWETINDQRVVVNQALHWNRDGYRTSRVKAPQRRKTVASTNCKARCYLALYKMTGQWRISRVETNRYDMPFGSFVGVNHHGMSTLLGCALLRNEDTRTFEWLFRTWLKCMGKAPICVITDQSLQMRSALETTLPHTRHRWCIWHILNKIPNKLVGYRHFDQLITCMKRIVFESKSKDSFERDWHDFIEEYDLHNSRWLNGSIIFWFLAASVWLLYRCYFIVIMDVALRDKEQKKLECDAADLRGIIPCVSSSPIEKQFQREYTNSMFRDVQDQFIKKADCDISLINHHGTSIICEVDQQKMVFDMSVYSRYQVVYCSQSSDVQCDCFMFQSNGILCCHSLAVLLHFRVTAVSSQYILSRWSKNVSRRHTYIRSSIDMDRSDESMTIFMQLCSDFYNIAQDFVATPEVAAILRDAMDSAWKKLREHKEFEHQAAYVPSAIYSHTHDECPVSMDELHGPRRVPTRGRPTSTRLGTDLEKSIKKRARKNKNTHNHNKGPNGNAQPSPTNVATSYKDTQPTCSEMTDNLAMHSGSFISLLNSFHNAEQLCICT 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01533 615 Pfam MULE transposase domain 130 213 IPR018289 -
Adu06g01533 615 ProSiteProfiles Zinc finger SWIM-type profile. 377 413 IPR007527 GO:0008270
Adu06g01533 615 Pfam FAR1 DNA-binding domain 49 130 IPR004330 -
Adu06g01533 615 PANTHER OS03G0843700 PROTEIN 131 452 - -
Adu06g01533 615 PANTHER OS03G0843700 PROTEIN 8 130 - -
Adu06g01533 615 Pfam SWIM zinc finger 384 411 IPR007527 GO:0008270
Adu06g01533 615 MobiDBLite consensus disorder prediction 558 579 - -
Adu06g01533 615 MobiDBLite consensus disorder prediction 518 579 - -
Adu06g01533 615 SMART 26again6 388 415 IPR006564 GO:0008270
Adu06g01533 615 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 131 452 IPR031052 GO:0006355
Adu06g01533 615 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 130 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01533 Adu-Chr6 36349433 36352964 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu06g01533 MULE 1.8e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01533 - K17604 ahf:112805526 850.121