Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01511 ATGAACAAGGTTGTGAGAAACAACCTTAGGGTTAGGCTTGGAGATGTCGTCTCTGTGCATCAATGTGCTGATGTCAAGTATGGAAAGAGAGTCCACATTCTTCCCGTTGACGACACTGTTGAAGGAGTAACAGGGAATCTCTTTGATGCATATTTAAAACCTTATTTCCTGGAGGCATATCGTCCAGTGAGGAAGGGTGACCTCTTTCTCGTGAGAGGAGGGATGAGAAGTGTTGAGTTCAAGGTTATTGAAACTGACCCATCTGAGTACTGTGTTGTTGCTCCAGACACAGAGATCTTCTGTGAAGGGGAACCCGTTAAAAGGGAAGATGAGAACAGATTAGACGAGGTTGGTTATGATGATGTTGGTGGTGTAAGAAAGCAGATGGCACAGATTCGGGAACTAGTGGAGCTGCCACTGAGGCACCCACAATTGTTCAAGTCTATTGGTGTTAAGCCACCAAAAGGAATTCTGCTGTATGGACCTCCTGGGTCTGGCAAGACTTTAATTGCCCGAGCAGTTGCGAATGAGACTGGTGCTTTCTTTTTCTGCATCAATGGCCCTGAGATCATGTCAAAACTGGCTGGTGAGAGTGAAAGCAATCTAAGAAAGGCATTTGAGGAAGCAGAGAAGAATGCACCTTCAATCATATTCATTGATGAGATAGATTCAATAGCTCCAAAGAGGGAGAAGACTCATGGAGAAGTTGAGAGGAGGATTGTTTCCCAACTCTTGACCCTCATGGATGGCCTTAAATCTCGTGCACATGTAATTGTTATTGGAGCTACAAATCGCCCGAATAGCATTGACCCTGCTCTTAGGAGGTTTGGAAGATTTGACAGGGAGATAGATATTGGTGTTCCAGATGAAGTTGGGCGTCTTGAAGTTCTTCGTATTCACACAAAGAATATGAAACTTTCTGAAGATGTTGATTTGGAGAAGATTGCTAAGGACACCCATGGATATGTTGGTGCTGATCTTGCTGCTTTGTGTACTGAAGCTGCACTTCAATGCATCAGAGAGAAAATGGATGTGATTGACTTGGAAGATGAATCAATTGATGCTGAGATATTGAACTCAATGGCAGTAACAAATGAGCACTTCTCAACTGCTCTTGGCTCAAGCAATCCTTCTGCTCTCCGTGAAACAGTTGTTGAAGTGCCCAATGTCAGCTGGGAAGATATTGGTGGTCTCGAAAACGTTAAGAGAGAACTCCAAGAGACTGTTCAATATCCAGTGGAACACCCTGAAAAGTTTGAGAAGTTTGGGATGTCACCTTCAAAGGGTGTCCTTTTCTATGGTCCTCCTGGTTGTGGTAAAACGCTTTTGGCAAAGGCGATTGCCAACGAATGTCAGGCAAACTTCATCAGTGTCAAGGGTCCAGAGCTACTCACAATGTGGTTTGGAGAAAGTGAGGCTAATGTGAGGGAAATTTTTGACAAGGCTCGTGGTTCTGCTCCATGTGTCCTATTCTTCGATGAACTTGACTCTATTGCAACTCAGAGAGGTAGCAGTGTTGGGGATGCCGGTGGTGCTGCTGATAGGGTTTTGAATCAACTTCTTACTGAAATGGATGGGATGTCAGCAAAGAAAACTGTCTTCATAATTGGTGCCACCAATCGACCAGACATCATAGACCCTGCTCTTCTACGTCCTGGCCGTCTAGATCAGTTGATTTATATCCCTCTCCCAGATGAGGATTCACGTCATCAGATATTTAAAGCTTGCTTGAGAAAATCCCCCATCTCAAAAGATGTTGACCTTAGAGCTCTTGCGAAGTACACTCAAGGTTTTAGTGGTGCTGATATCACTGAGATTTGCCAGCGTGCATGCAAGTATGCCATAAGAGAAAATATTGAGAAGGACATTGAGAGAGAAAGGAGGAGAAGGGACAACCCAGAGGCAATGGAAGAGGATGTTGAAGACGAAGTGGCAGAAATCAAGGCAGCTCATTTTGAGGAGTCTATGAAGTATGCACGAAGGAGTGTTAGCGATGCCGACATTCGCAAGTACCAGGCATTTGCCCAAACATTGCAGCAGTCAAGAGGTTTTGGAACCGAGTTTAGGTTCGCAGATACTACCTCTGGTGGTACCGCAGCGGCATCGGATCCATTTGCATCTGCTGGGGGAGCTGATGAAGATGATCTTTACAGTTAG 2157 0.4483 MNKVVRNNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPSEYCVVAPDTEIFCEGEPVKREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSEDVDLEKIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDESIDAEILNSMAVTNEHFSTALGSSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPISKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRRDNPEAMEEDVEDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFADTTSGGTAAASDPFASAGGADEDDLYS 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01511 718 PANTHER CELL DIVISION CYCLE PROTEIN 48 HOMOLOG 1 693 - -
Adu06g01511 718 Pfam ATPase family associated with various cellular activities (AAA) 157 286 IPR003959 GO:0005524|GO:0016887
Adu06g01511 718 Pfam ATPase family associated with various cellular activities (AAA) 430 563 IPR003959 GO:0005524|GO:0016887
Adu06g01511 718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 388 676 IPR027417 -
Adu06g01511 718 ProSitePatterns AAA-protein family signature. 257 275 IPR003960 GO:0005524|GO:0016887
Adu06g01511 718 Pfam AAA+ lid domain 585 625 IPR041569 -
Adu06g01511 718 Pfam AAA+ lid domain 309 351 IPR041569 -
Adu06g01511 718 Gene3D - 567 675 - -
Adu06g01511 718 Gene3D - 122 286 IPR027417 -
Adu06g01511 718 Gene3D - 25 121 - -
Adu06g01511 718 Gene3D - 380 563 IPR027417 -
Adu06g01511 718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 116 378 IPR027417 -
Adu06g01511 718 SMART AAA_5 426 565 IPR003593 -
Adu06g01511 718 SMART AAA_5 153 289 IPR003593 -
Adu06g01511 718 PANTHER AAA-FAMILY ATPASE 1 693 - -
Adu06g01511 718 Gene3D - 288 379 - -
Adu06g01511 718 SUPERFAMILY Cdc48 domain 2-like 24 116 IPR029067 -
Adu06g01511 718 Pfam Cell division protein 48 (CDC48), domain 2 44 107 IPR004201 -
Adu06g01511 718 MobiDBLite consensus disorder prediction 693 718 - -
Adu06g01511 718 TIGRFAM CDC48: AAA family ATPase, CDC48 subfamily 2 679 IPR005938 GO:0016787
Adu06g01511 718 ProSitePatterns AAA-protein family signature. 533 551 IPR003960 GO:0005524|GO:0016887
Adu06g01511 718 CDD AAA 396 563 - -
Adu06g01511 718 CDD AAA 123 286 - -
Adu06g01511 718 Gene3D - 1 24 - -
Adu06g01511 718 SMART CDC48_2_2 42 108 IPR004201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01511 Adu-Chr6 32246623 32249486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01511 359 689 Calmodulin-binding Proteins AT3G56690 43.202 3.37e-81 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01511 K13525 - gmx:100791603 1358.2